RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ST3GAL5Q9UNP4 418 aa24.41■■□□□ 1.5
CHMP2A-204ENST00000597848 TRAK2O60296 914 aa24.4■■□□□ 1.5
CHMP2A-204ENST00000597848 MCM4P33991 863 aa24.4■■□□□ 1.5
CHMP2A-204ENST00000597848 EPHB4P54760 987 aa24.4■■□□□ 1.5
CHMP2A-204ENST00000597848 PLEKHG4Q58EX7 1191 aa24.4■■□□□ 1.5
CHMP2A-204ENST00000597848 CNNM4Q6P4Q7 775 aa24.4■■□□□ 1.5
CHMP2A-204ENST00000597848 CATSPER4Q7RTX7 472 aa24.4■■□□□ 1.5
CHMP2A-204ENST00000597848 FAM228AQ86W67 206 aa24.4■■□□□ 1.5
CHMP2A-204ENST00000597848 SFR1Q86XK3 245 aa24.4■■□□□ 1.5
CHMP2A-204ENST00000597848 IFNLR1Q8IU57 520 aaPredicted RBP24.4■■□□□ 1.5
CHMP2A-204ENST00000597848 NFKBIZQ9BYH8 718 aa24.4■■□□□ 1.5
CHMP2A-204ENST00000597848 HOOK1Q9UJC3 728 aaKnown RBP24.4■■□□□ 1.5
CHMP2A-204ENST00000597848 FGBP02675 491 aa24.39■■□□□ 1.49
CHMP2A-204ENST00000597848 MYL1P05976 194 aa24.39■■□□□ 1.49
CHMP2A-204ENST00000597848 PRR29P0C7W0 189 aa24.39■■□□□ 1.49
CHMP2A-204ENST00000597848 EFNA5P52803 228 aa24.39■■□□□ 1.49
CHMP2A-204ENST00000597848 CDCA2Q69YH5 1023 aaPredicted RBP24.39■■□□□ 1.49
CHMP2A-204ENST00000597848 C16orf59Q7L2K0 433 aa24.39■■□□□ 1.49
CHMP2A-204ENST00000597848 FAM178BQ8IXR5 827 aa24.39■■□□□ 1.49
CHMP2A-204ENST00000597848 NTPCRQ9BSD7 190 aaKnown RBP24.39■■□□□ 1.49
CHMP2A-204ENST00000597848 ERVK-5Q9HDB9 667 aa24.39■■□□□ 1.49
CHMP2A-204ENST00000597848 TBC1D7Q9P0N9 293 aa24.39■■□□□ 1.49
CHMP2A-204ENST00000597848 K7ERI5 159 aa24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 ERLIN2O94905 339 aa24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 ACTN1P12814 892 aa24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 MBTD1Q05BQ5 628 aa24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 POSTNQ15063 836 aa24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 CNKSR3Q6P9H4 555 aa24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 PSRC1Q6PGN9 363 aaPredicted RBP24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 UNC13DQ70J99 1090 aa24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 ZNF365Q70YC5 407 aa24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 APBB2Q92870 758 aa24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 VWCEQ96DN2 955 aa24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 UBE2OQ9C0C9 1292 aaKnown RBP24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 SEL1LQ9UBV2 794 aa24.38■■□□□ 1.49
CHMP2A-204ENST00000597848 ADGRA3Q8IWK6 1321 aa24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 TANC1Q9C0D5 1861 aa24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 PVALEFA0A1B0GWK0 134 aa24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 FRMD3A2A2Y4 597 aa24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 H0YCG3 227 aa24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 K7ENM7 598 aa24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 NCBP1Q09161 790 aaKnown RBP24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 COASYQ13057 564 aa24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 IKBKEQ14164 716 aa24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 MAPK6Q16659 721 aa24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 MRPL44Q9H9J2 332 aaKnown RBP24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 SCN5AQ14524 2016 aa24.37■■□□□ 1.49
CHMP2A-204ENST00000597848 LTBP2Q14767 1821 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 DENND3A2RUS2 1198 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 NMT1P30419 496 aaKnown RBP24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 DPYDQ12882 1025 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 PNOCQ13519 176 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 TMEM132AQ24JP5 1023 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 TCTN1Q2MV58 587 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 TMEM240Q5SV17 173 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 OTOP2Q7RTS6 562 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 HAUS6Q7Z4H7 955 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 SLC17A8Q8NDX2 589 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 TMEM161BQ8NDZ6 487 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 CCDC47Q96A33 483 aaKnown RBP24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 GDF15Q99988 308 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 TMEM134Q9H6X4 195 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 PRMT7Q9NVM4 692 aaPredicted RBP24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 ARHGAP28Q9P2N2 729 aa24.36■■□□□ 1.49
CHMP2A-204ENST00000597848 RPN1P04843 607 aaKnown RBP24.35■■□□□ 1.49
CHMP2A-204ENST00000597848 PRKCBP05771 671 aa24.35■■□□□ 1.49
CHMP2A-204ENST00000597848 ZSCAN20P17040 1043 aaPredicted RBP24.35■■□□□ 1.49
CHMP2A-204ENST00000597848 NCKAP1LP55160 1127 aa24.35■■□□□ 1.49
CHMP2A-204ENST00000597848 STRN3Q13033 797 aa24.35■■□□□ 1.49
CHMP2A-204ENST00000597848 PCBP1Q15365 356 aaKnown RBP eCLIP24.35■■□□□ 1.49
CHMP2A-204ENST00000597848 FTHL17Q9BXU8 183 aa24.35■■□□□ 1.49
CHMP2A-204ENST00000597848 TMX1Q9H3N1 280 aa24.35■■□□□ 1.49
CHMP2A-204ENST00000597848 FZD8Q9H461 694 aa24.35■■□□□ 1.49
CHMP2A-204ENST00000597848 EXOC1Q9NV70 894 aa24.35■■□□□ 1.49
CHMP2A-204ENST00000597848 ZBBXA8MT70 800 aa24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 KLRC4O43908 158 aa24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 SMC2O95347 1197 aa24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 MAPTP10636 758 aaKnown RBP24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 PRPF4BQ13523 1007 aaKnown RBP24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 KMT5BQ4FZB7 885 aa24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 ZNF720Q7Z2F6 126 aa24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 ELOA2Q8IYF1 753 aaPredicted RBP24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 GPT2Q8TD30 523 aa24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 HPS3Q969F9 1004 aa24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 CCDC113Q9H0I3 377 aa24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 OLFML3Q9NRN5 406 aa24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 PIN4Q9Y237 131 aaKnown RBP24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 PDE4DIPQ5VU43 2346 aa24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 PHLPP2Q6ZVD8 1323 aa24.34■■□□□ 1.49
CHMP2A-204ENST00000597848 SIP14410 1827 aa24.33■■□□□ 1.49
CHMP2A-204ENST00000597848 ABHD14A-ACY1A0A1B0GW23 586 aa24.33■■□□□ 1.49
CHMP2A-204ENST00000597848 B4GALT5O43286 388 aa24.33■■□□□ 1.49
CHMP2A-204ENST00000597848 TSPAN1O60635 241 aa24.33■■□□□ 1.49
CHMP2A-204ENST00000597848 GCNT3O95395 438 aa24.33■■□□□ 1.49
CHMP2A-204ENST00000597848 CAMK4Q16566 473 aa24.33■■□□□ 1.49
CHMP2A-204ENST00000597848 FAM26FQ5R3K3 315 aa24.33■■□□□ 1.49
CHMP2A-204ENST00000597848 ERCC4Q92889 916 aaPredicted RBP24.33■■□□□ 1.49
CHMP2A-204ENST00000597848 PRIMPOLQ96LW4 560 aa24.33■■□□□ 1.49
CHMP2A-204ENST00000597848 FIZ1Q96SL8 496 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms