RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 ALG6Q9Y672 507 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 COL5A3P25940 1745 aaPredicted RBP13.57□□□□□ -0.24
ZNF558-205ENST00000597304 A8MUI8 341 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 MSH2P43246 934 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 CCNHP51946 323 aaPredicted RBP13.57□□□□□ -0.24
ZNF558-205ENST00000597304 ZNF543Q08ER8 600 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 SEL1L2Q5TEA6 688 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 TTC27Q6P3X3 843 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 FAM186BQ8IYM0 893 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 ARHGEF3Q9NR81 526 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 SLC5A4Q9NY91 659 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 TAS2R14Q9NYV8 317 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 ATF5Q9Y2D1 282 aaPredicted RBP13.57□□□□□ -0.24
ZNF558-205ENST00000597304 ARL2BPQ9Y2Y0 163 aa13.57□□□□□ -0.24
ZNF558-205ENST00000597304 COL14A1Q05707 1796 aaKnown RBP13.57□□□□□ -0.24
ZNF558-205ENST00000597304 TMEM120BA0PK00 339 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 TBCAO75347 108 aaKnown RBP13.56□□□□□ -0.24
ZNF558-205ENST00000597304 GGPS1O95749 300 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 ATP5DP30049 168 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 ATP11AP98196 1134 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 GRIK3Q13003 919 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 C11orf63Q6NUN7 778 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 OTUD6AQ7L8S5 288 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 SPATA21Q7Z572 469 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 CCDC25Q86WR0 208 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 ERICH1Q86X53 443 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 ARMC2Q8NEN0 867 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 ARHGEF2Q92974 986 aaKnown RBP13.56□□□□□ -0.24
ZNF558-205ENST00000597304 CNKSR1Q969H4 720 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 MOV10L1Q9BXT6 1211 aaKnown RBP13.56□□□□□ -0.24
ZNF558-205ENST00000597304 RTCBQ9Y3I0 505 aaKnown RBP13.56□□□□□ -0.24
ZNF558-205ENST00000597304 PCDHA3Q9Y5H8 950 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 MYO3BQ8WXR4 1341 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 GPR75-ASB3A0A0A6YYF3 556 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 RSPH10B2B2RC85 870 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 ZBTB5O15062 677 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 SMNDC1O75940 238 aaKnown RBP eCLIP13.56□□□□□ -0.24
ZNF558-205ENST00000597304 GJB6O95452 261 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 RSPH10BP0C881 870 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 ATP2A2P16615 1042 aaKnown RBP13.56□□□□□ -0.24
ZNF558-205ENST00000597304 PSMC2P35998 433 aaKnown RBP13.56□□□□□ -0.24
ZNF558-205ENST00000597304 FMO5P49326 533 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 LONRF1Q17RB8 773 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 CAPRIN2Q6IMN6 1127 aaKnown RBP13.56□□□□□ -0.24
ZNF558-205ENST00000597304 ZNF804AQ7Z570 1209 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 NBPF5PQ86XG9 351 aaPredicted RBP13.56□□□□□ -0.24
ZNF558-205ENST00000597304 SPICE1Q8N0Z3 855 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 MICAL1Q8TDZ2 1067 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 KRT35Q92764 455 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 ART4Q93070 314 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 RXFP1Q9HBX9 757 aa13.56□□□□□ -0.24
ZNF558-205ENST00000597304 PFASO15067 1338 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 FRMPD4Q14CM0 1322 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 ALAS1P13196 640 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 HADHBP55084 474 aaKnown RBP13.55□□□□□ -0.24
ZNF558-205ENST00000597304 KCNA1Q09470 495 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 TTBK2Q6IQ55 1244 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 TRMT10CQ7L0Y3 403 aaKnown RBP13.55□□□□□ -0.24
ZNF558-205ENST00000597304 CYFIP1Q7L576 1253 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 CCDC105Q8IYK2 499 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 CCDC24Q8N4L8 307 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 BORCS6Q96GS4 357 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 ZSWIM1Q9BR11 485 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 GPR88Q9GZN0 384 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 CTTNBP2NLQ9P2B4 639 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 PNMA3Q9UL41 463 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 PASKQ96RG2 1323 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 TMEM110-MUSTN1A8MSY1 372 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 USP17L15C9J2P7 530 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 USP17L13C9JLJ4 530 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 USP17L11C9JVI0 530 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 USP17L18D6R9N7 530 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 USP17L22D6RA61 530 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 USP17L17D6RBQ6 530 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 USP17L19D6RCP7 530 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 USP17L20D6RJB6 530 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 LIN7AO14910 233 aaPredicted RBP13.55□□□□□ -0.24
ZNF558-205ENST00000597304 RPA1P27694 616 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 MARCKSL1P49006 195 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 USP17L24Q0WX57 530 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 USP17L6PQ6QN14 398 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 ASRGL1Q7L266 308 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 PALB2Q86YC2 1186 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 ANKRD42Q8N9B4 389 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 SERPINB12Q96P63 405 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 TRIM7Q9C029 511 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 PTPN22Q9Y2R2 807 aa13.55□□□□□ -0.24
ZNF558-205ENST00000597304 ANKRD63C9JTQ0 380 aa13.54□□□□□ -0.24
ZNF558-205ENST00000597304 LUC7L3O95232 432 aaKnown RBP13.54□□□□□ -0.24
ZNF558-205ENST00000597304 CDC25CP30307 473 aa13.54□□□□□ -0.24
ZNF558-205ENST00000597304 SLC16A2P36021 539 aa13.54□□□□□ -0.24
ZNF558-205ENST00000597304 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
ZNF558-205ENST00000597304 CALCOCO2Q13137 446 aa13.54□□□□□ -0.24
ZNF558-205ENST00000597304 ANKRD20A2Q5SQ80 823 aa13.54□□□□□ -0.24
ZNF558-205ENST00000597304 ANKRD20A1Q5TYW2 823 aa13.54□□□□□ -0.24
ZNF558-205ENST00000597304 ANKRD20A3Q5VUR7 823 aa13.54□□□□□ -0.24
ZNF558-205ENST00000597304 CDCA2Q69YH5 1023 aaPredicted RBP13.54□□□□□ -0.24
ZNF558-205ENST00000597304 VSTM1Q6UX27 236 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms