RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 TFDP1Q14186 410 aa17.12■□□□□ 0.33
SMCO4-206ENST00000596676 POSTNQ15063 836 aa17.12■□□□□ 0.33
SMCO4-206ENST00000596676 KMT5BQ4FZB7 885 aa17.12■□□□□ 0.33
SMCO4-206ENST00000596676 ZC2HC1CQ53FD0 456 aaPredicted RBP17.12■□□□□ 0.33
SMCO4-206ENST00000596676 HERC4Q5GLZ8 1057 aaPredicted RBP17.12■□□□□ 0.33
SMCO4-206ENST00000596676 CNNM4Q6P4Q7 775 aa17.12■□□□□ 0.33
SMCO4-206ENST00000596676 TSHZ1Q6ZSZ6 1077 aa17.12■□□□□ 0.33
SMCO4-206ENST00000596676 TIGD1Q96MW7 591 aa17.12■□□□□ 0.33
SMCO4-206ENST00000596676 INO80BQ9C086 356 aaPredicted RBP17.12■□□□□ 0.33
SMCO4-206ENST00000596676 TMX1Q9H3N1 280 aa17.12■□□□□ 0.33
SMCO4-206ENST00000596676 KMT5AQ9NQR1 393 aa17.12■□□□□ 0.33
SMCO4-206ENST00000596676 PADI3Q9ULW8 664 aa17.12■□□□□ 0.33
SMCO4-206ENST00000596676 ST3GAL5Q9UNP4 418 aa17.12■□□□□ 0.33
SMCO4-206ENST00000596676 PDE4DIPQ5VU43 2346 aa17.12■□□□□ 0.33
SMCO4-206ENST00000596676 TRAK2O60296 914 aa17.11■□□□□ 0.33
SMCO4-206ENST00000596676 RPN1P04843 607 aaKnown RBP17.11■□□□□ 0.33
SMCO4-206ENST00000596676 MYBP10242 640 aa17.11■□□□□ 0.33
SMCO4-206ENST00000596676 PHKA2P46019 1235 aa17.11■□□□□ 0.33
SMCO4-206ENST00000596676 DMP1Q13316 513 aaPredicted RBP17.11■□□□□ 0.33
SMCO4-206ENST00000596676 AMHR2Q16671 573 aa17.11■□□□□ 0.33
SMCO4-206ENST00000596676 CDCA2Q69YH5 1023 aaPredicted RBP17.11■□□□□ 0.33
SMCO4-206ENST00000596676 UNC13DQ70J99 1090 aa17.11■□□□□ 0.33
SMCO4-206ENST00000596676 SRGAP1Q7Z6B7 1085 aa17.11■□□□□ 0.33
SMCO4-206ENST00000596676 RTN4RL1Q86UN2 441 aaPredicted RBP17.11■□□□□ 0.33
SMCO4-206ENST00000596676 TMEM161BQ8NDZ6 487 aa17.11■□□□□ 0.33
SMCO4-206ENST00000596676 LBHD1Q9BQE6 289 aaPredicted RBP17.11■□□□□ 0.33
SMCO4-206ENST00000596676 IFIH1Q9BYX4 1025 aaKnown RBP17.11■□□□□ 0.33
SMCO4-206ENST00000596676 LRRC27Q9C0I9 530 aa17.11■□□□□ 0.33
SMCO4-206ENST00000596676 CCDC113Q9H0I3 377 aa17.11■□□□□ 0.33
SMCO4-206ENST00000596676 IL23AQ9NPF7 189 aa17.11■□□□□ 0.33
SMCO4-206ENST00000596676 RPLP2P05387 115 aaKnown RBP17.1■□□□□ 0.33
SMCO4-206ENST00000596676 NCKAP1LP55160 1127 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 POU5F1BQ06416 359 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 PPP2R5AQ15172 486 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 PLEKHG4Q58EX7 1191 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 ISM2Q6H9L7 571 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 ZNF365Q70YC5 407 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 HAUS6Q7Z4H7 955 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 CDR2LQ86X02 465 aaPredicted RBP17.1■□□□□ 0.33
SMCO4-206ENST00000596676 IFNLR1Q8IU57 520 aaPredicted RBP17.1■□□□□ 0.33
SMCO4-206ENST00000596676 CCDC65Q8IXS2 484 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 SPIRE2Q8WWL2 714 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 LINC01599Q8WXQ3 324 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 CPB2Q96IY4 423 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMCO4-206ENST00000596676 NTPCRQ9BSD7 190 aaKnown RBP17.1■□□□□ 0.33
SMCO4-206ENST00000596676 LARSQ9P2J5 1176 aaKnown RBP17.1■□□□□ 0.33
SMCO4-206ENST00000596676 ARHGAP28Q9P2N2 729 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 PCDHA5Q9Y5H7 936 aa17.1■□□□□ 0.33
SMCO4-206ENST00000596676 DENND3A2RUS2 1198 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 K7ENM7 598 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 MAPTP10636 758 aaKnown RBP17.09■□□□□ 0.33
SMCO4-206ENST00000596676 GAP43P17677 238 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 IBSPP21815 317 aaPredicted RBP17.09■□□□□ 0.33
SMCO4-206ENST00000596676 CDC42EP1Q00587 391 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 EHHADHQ08426 723 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 KCNA1Q09470 495 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 PAK2Q13177 524 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 TMEM240Q5SV17 173 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 NT5DC1Q5TFE4 455 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 KANK3Q6NY19 840 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 OTOP2Q7RTS6 562 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 CATSPER4Q7RTX7 472 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 FAM178BQ8IXR5 827 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 FZD8Q9H461 694 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 CLSTN2Q9H4D0 955 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 MRPL44Q9H9J2 332 aaKnown RBP17.09■□□□□ 0.33
SMCO4-206ENST00000596676 C17orf75Q9HAS0 396 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 SLC39A2Q9NP94 309 aa17.09■□□□□ 0.33
SMCO4-206ENST00000596676 PVALEFA0A1B0GWK0 134 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 K7ERI5 159 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 TSPAN1O60635 241 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 PRKCBP05771 671 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 HOXA11P31270 313 aaPredicted RBP17.08■□□□□ 0.32
SMCO4-206ENST00000596676 RFC2P35250 354 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 SMTNP53814 917 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 PPIGQ13427 754 aaKnown RBP eCLIP17.08■□□□□ 0.32
SMCO4-206ENST00000596676 C9orf50Q5SZB4 431 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 ZNF720Q7Z2F6 126 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 ZBTB8OSQ8IWT0 167 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 SEPT8Q92599 483 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 NFKBIZQ9BYH8 718 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 GDAQ9Y2T3 454 aa17.08■□□□□ 0.32
SMCO4-206ENST00000596676 TISP43B9A030 160 aa17.07■□□□□ 0.32
SMCO4-206ENST00000596676 BIN1O00499 593 aa17.07■□□□□ 0.32
SMCO4-206ENST00000596676 GPR182O15218 404 aa17.07■□□□□ 0.32
SMCO4-206ENST00000596676 PRPF6O94906 941 aaKnown RBP17.07■□□□□ 0.32
SMCO4-206ENST00000596676 GCNT3O95395 438 aa17.07■□□□□ 0.32
SMCO4-206ENST00000596676 ARF4P18085 180 aaPredicted RBP17.07■□□□□ 0.32
SMCO4-206ENST00000596676 HOXD13P35453 343 aa17.07■□□□□ 0.32
SMCO4-206ENST00000596676 STK4Q13043 487 aa17.07■□□□□ 0.32
SMCO4-206ENST00000596676 DSC3Q14574 896 aa17.07■□□□□ 0.32
SMCO4-206ENST00000596676 FAM26FQ5R3K3 315 aa17.07■□□□□ 0.32
SMCO4-206ENST00000596676 EEF1DP3Q658K8 133 aa17.07■□□□□ 0.32
SMCO4-206ENST00000596676 CNKSR3Q6P9H4 555 aa17.07■□□□□ 0.32
SMCO4-206ENST00000596676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMCO4-206ENST00000596676 TMCO2Q7Z6W1 182 aaPredicted RBP17.07■□□□□ 0.32
SMCO4-206ENST00000596676 SMYD4Q8IYR2 804 aaPredicted RBP17.07■□□□□ 0.32
SMCO4-206ENST00000596676 RPUSD2Q8IZ73 545 aaKnown RBP17.07■□□□□ 0.32
SMCO4-206ENST00000596676 KIAA0895Q8NCT3 520 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms