RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 PCDHA5Q9Y5H7 936 aa20.24■□□□□ 0.83
CROCCP3-205ENST00000591316 FRMD3A2A2Y4 597 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 K7ERI5 159 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 KLRC4O43908 158 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 CD52P31358 61 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 POU5F1BQ06416 359 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 ISM2Q6H9L7 571 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 SRGAP1Q7Z6B7 1085 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 ADGRA3Q8IWK6 1321 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 SPIRE2Q8WWL2 714 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 SMARCE1Q969G3 411 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 NUP62CLQ9H1M0 184 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 CLSTN2Q9H4D0 955 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 USP20Q9Y2K6 914 aa20.23■□□□□ 0.83
CROCCP3-205ENST00000591316 K7ENM7 598 aa20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 SMC2O95347 1197 aa20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 ACRP10323 421 aa20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 ZC2HC1CQ53FD0 456 aaPredicted RBP20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 HAUS6Q7Z4H7 955 aa20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 ELOA2Q8IYF1 753 aaPredicted RBP20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 CCDC47Q96A33 483 aaKnown RBP20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 C2orf40Q9H1Z8 148 aa20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 SLC39A2Q9NP94 309 aa20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 EXOC1Q9NV70 894 aa20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 PADI3Q9ULW8 664 aa20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 ST3GAL5Q9UNP4 418 aa20.22■□□□□ 0.83
CROCCP3-205ENST00000591316 DENND3A2RUS2 1198 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 GCNT3O95395 438 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 PTMSP20962 102 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 MBTD1Q05BQ5 628 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 PAK2Q13177 524 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 TSHZ1Q6ZSZ6 1077 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 CATSPER4Q7RTX7 472 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 ZNF720Q7Z2F6 126 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 FAM228AQ86W67 206 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 TMEM161BQ8NDZ6 487 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 DBF4BQ8NFT6 615 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 FIZ1Q96SL8 496 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 FGFBP2Q9BYJ0 223 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 SEL1LQ9UBV2 794 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 GPR182O15218 404 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 PARNO95453 639 aaKnown RBP20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 NCKAP1LP55160 1127 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 MLLT1Q03111 559 aaPredicted RBP20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 MAPK6Q16659 721 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 FAM26FQ5R3K3 315 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 CDCA2Q69YH5 1023 aaPredicted RBP20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 RPUSD2Q8IZ73 545 aaKnown RBP20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 USP38Q8NB14 1042 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 GLIS3Q8NEA6 775 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 NFKBIZQ9BYH8 718 aa20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 IFIH1Q9BYX4 1025 aaKnown RBP20.21■□□□□ 0.83
CROCCP3-205ENST00000591316 ERLIN2O94905 339 aa20.2■□□□□ 0.82
CROCCP3-205ENST00000591316 MYBP10242 640 aa20.2■□□□□ 0.82
CROCCP3-205ENST00000591316 SFPQP23246 707 aaKnown RBP eCLIP20.2■□□□□ 0.82
CROCCP3-205ENST00000591316 CASP5P51878 434 aa20.2■□□□□ 0.82
CROCCP3-205ENST00000591316 EFNA5P52803 228 aa20.2■□□□□ 0.82
CROCCP3-205ENST00000591316 FPGSQ05932 587 aa20.2■□□□□ 0.82
CROCCP3-205ENST00000591316 TMEM132AQ24JP5 1023 aa20.2■□□□□ 0.82
CROCCP3-205ENST00000591316 IFNLR1Q8IU57 520 aaPredicted RBP20.2■□□□□ 0.82
CROCCP3-205ENST00000591316 ARHGAP28Q9P2N2 729 aa20.2■□□□□ 0.82
CROCCP3-205ENST00000591316 SQORQ9Y6N5 450 aa20.2■□□□□ 0.82
CROCCP3-205ENST00000591316 H0YGN5 161 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 BIN1O00499 593 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 PRPF6O94906 941 aaKnown RBP20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 PRKCBP05771 671 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 MAPTP10636 758 aaKnown RBP20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 RFC2P35250 354 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 STRN3Q13033 797 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 STK4Q13043 487 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 PLEKHG4Q58EX7 1191 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 SEPT8Q92599 483 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 CPB2Q96IY4 423 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 FZD8Q9H461 694 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 TMEM134Q9H6X4 195 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 OLFML3Q9NRN5 406 aa20.19■□□□□ 0.82
CROCCP3-205ENST00000591316 H0YCG3 227 aa20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 B4GALT5O43286 388 aa20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 IBSPP21815 317 aaPredicted RBP20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 SARSP49591 514 aaKnown RBP20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 EHHADHQ08426 723 aa20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 NCBP1Q09161 790 aaKnown RBP20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 PPIGQ13427 754 aaKnown RBP eCLIP20.18■□□□□ 0.825e-11■■■■□ 23.4
CROCCP3-205ENST00000591316 CAVIN1Q6NZI2 390 aaKnown RBP20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 TAS1R3Q7RTX0 852 aa20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 VWCEQ96DN2 955 aa20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 GSDMAQ96QA5 445 aa20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 ERVK-5Q9HDB9 667 aa20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 IL23AQ9NPF7 189 aa20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 PRMT7Q9NVM4 692 aaPredicted RBP20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 KIAA1468Q9P260 1216 aa20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 TBX20Q9UMR3 447 aa20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 PCDHB13Q9Y5F0 798 aa20.18■□□□□ 0.82
CROCCP3-205ENST00000591316 TTLL13PA6NNM8 815 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 RHOBTB3O94955 611 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 CXCL10P02778 98 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 EPHB4P54760 987 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 GTF2BQ00403 316 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 KCNA1Q09470 495 aa20.17■□□□□ 0.82
CROCCP3-205ENST00000591316 PSMD2Q13200 908 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms