RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 PBX2P40425 430 aa23.55■■□□□ 1.36
ATG4D-212ENST00000590096 NCBP1Q09161 790 aaKnown RBP23.55■■□□□ 1.36
ATG4D-212ENST00000590096 DMP1Q13316 513 aaPredicted RBP23.55■■□□□ 1.36
ATG4D-212ENST00000590096 DSC3Q14574 896 aa23.55■■□□□ 1.36
ATG4D-212ENST00000590096 RESP18Q5W5W9 173 aa23.55■■□□□ 1.36
ATG4D-212ENST00000590096 SV2BQ7L1I2 683 aa23.55■■□□□ 1.36
ATG4D-212ENST00000590096 C17orf75Q9HAS0 396 aa23.55■■□□□ 1.36
ATG4D-212ENST00000590096 MYH11P35749 1972 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 A0A087X0B3 334 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 STAG3L1P0CL83 205 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 SARSP49591 514 aaKnown RBP23.54■■□□□ 1.36
ATG4D-212ENST00000590096 PEX3P56589 373 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 MBTD1Q05BQ5 628 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 NAALADL2Q58DX5 795 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 ARSHQ5FYA8 562 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 CDCA2Q69YH5 1023 aaPredicted RBP23.54■■□□□ 1.36
ATG4D-212ENST00000590096 ADALQ6DHV7 355 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 SLC24A5Q71RS6 500 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 DAW1Q8N136 415 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 TSHZ2Q9NRE2 1034 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 AGPAT5Q9NUQ2 364 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 CHMP5Q9NZZ3 219 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 KCNG1Q9UIX4 513 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 LRFN2Q9ULH4 789 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 ODF2LQ9ULJ1 636 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 TTC3P53804 2025 aa23.54■■□□□ 1.36
ATG4D-212ENST00000590096 NPHP3-ACAD11A0A0J9YXS1 232 aa23.53■■□□□ 1.36
ATG4D-212ENST00000590096 CCDC169A6NNP5 214 aa23.53■■□□□ 1.36
ATG4D-212ENST00000590096 CACNB1Q02641 598 aaPredicted RBP23.53■■□□□ 1.36
ATG4D-212ENST00000590096 MAPK7Q13164 816 aa23.53■■□□□ 1.36
ATG4D-212ENST00000590096 TWF2Q6IBS0 349 aaKnown RBP23.53■■□□□ 1.36
ATG4D-212ENST00000590096 NPAS4Q8IUM7 802 aa23.53■■□□□ 1.36
ATG4D-212ENST00000590096 IQUBQ8NA54 791 aa23.53■■□□□ 1.36
ATG4D-212ENST00000590096 TIFAQ96CG3 184 aa23.53■■□□□ 1.36
ATG4D-212ENST00000590096 RAD9AQ99638 391 aa23.53■■□□□ 1.36
ATG4D-212ENST00000590096 REEP2Q9BRK0 252 aa23.53■■□□□ 1.36
ATG4D-212ENST00000590096 PYM1Q9BRP8 204 aaKnown RBP23.53■■□□□ 1.36
ATG4D-212ENST00000590096 SFI1A8K8P3 1242 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 C9IYK1 514 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 FAM13AO94988 1023 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 NPTX2P47972 431 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 EFNA5P52803 228 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 GPR153Q6NV75 609 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 DHX58Q96C10 678 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 YME1L1Q96TA2 773 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 CUEDC2Q9H467 287 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 GDPD2Q9HCC8 539 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 KMT5AQ9NQR1 393 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 PRMT7Q9NVM4 692 aaPredicted RBP23.52■■□□□ 1.36
ATG4D-212ENST00000590096 LARSQ9P2J5 1176 aaKnown RBP23.52■■□□□ 1.36
ATG4D-212ENST00000590096 YBX2Q9Y2T7 364 aaKnown RBP23.52■■□□□ 1.36
ATG4D-212ENST00000590096 INSL6Q9Y581 213 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 PCDHB7Q9Y5E2 793 aa23.52■■□□□ 1.36
ATG4D-212ENST00000590096 TBCAO75347 108 aaKnown RBP23.51■■□□□ 1.35
ATG4D-212ENST00000590096 PLS3P13797 630 aa23.51■■□□□ 1.35
ATG4D-212ENST00000590096 MYOGP15173 224 aa23.51■■□□□ 1.35
ATG4D-212ENST00000590096 LIG1P18858 919 aa23.51■■□□□ 1.35
ATG4D-212ENST00000590096 CMA1P23946 247 aa23.51■■□□□ 1.35
ATG4D-212ENST00000590096 AXLP30530 894 aa23.51■■□□□ 1.35
ATG4D-212ENST00000590096 SMTNP53814 917 aa23.51■■□□□ 1.35
ATG4D-212ENST00000590096 MAPK6Q16659 721 aa23.51■■□□□ 1.35
ATG4D-212ENST00000590096 PRIMPOLQ96LW4 560 aa23.51■■□□□ 1.35
ATG4D-212ENST00000590096 KIFC3Q9BVG8 833 aa23.51■■□□□ 1.35
ATG4D-212ENST00000590096 NKX2-4Q9H2Z4 354 aa23.51■■□□□ 1.35
ATG4D-212ENST00000590096 SLC28A3Q9HAS3 691 aa23.51■■□□□ 1.35
ATG4D-212ENST00000590096 POLR2DO15514 142 aaKnown RBP23.5■■□□□ 1.35
ATG4D-212ENST00000590096 TSPAN1O60635 241 aa23.5■■□□□ 1.35
ATG4D-212ENST00000590096 GIT2Q14161 759 aa23.5■■□□□ 1.35
ATG4D-212ENST00000590096 E2F4Q16254 413 aa23.5■■□□□ 1.35
ATG4D-212ENST00000590096 ZNF697Q5TEC3 545 aa23.5■■□□□ 1.35
ATG4D-212ENST00000590096 NOTUMQ6P988 496 aa23.5■■□□□ 1.35
ATG4D-212ENST00000590096 ZHX3Q9H4I2 956 aa23.5■■□□□ 1.35
ATG4D-212ENST00000590096 PARVGQ9HBI0 331 aa23.5■■□□□ 1.35
ATG4D-212ENST00000590096 KCNH3Q9ULD8 1083 aa23.5■■□□□ 1.35
ATG4D-212ENST00000590096 PHLPP2Q6ZVD8 1323 aa23.5■■□□□ 1.35
ATG4D-212ENST00000590096 LAMA2P24043 3122 aaKnown RBP23.5■■□□□ 1.35
ATG4D-212ENST00000590096 TMEM265A0A087WTH1 108 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 PRKCBP05771 671 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 CA3P07451 260 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 SKIP12755 728 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 RAB27AP51159 221 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 FAM189BP81408 668 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 HTRA4P83105 476 aaPredicted RBP23.49■■□□□ 1.35
ATG4D-212ENST00000590096 AMHR2Q16671 573 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 TMEM132AQ24JP5 1023 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 TPRNQ4KMQ1 711 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 PPP2R2DQ66LE6 453 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 PPP4R3CPQ6ZMV5 832 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 DYMQ7RTS9 669 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 MYCT1Q8N699 235 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 SPIRE2Q8WWL2 714 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 DDX12PQ92771 950 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 LRRC27Q9C0I9 530 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 TNMDQ9H2S6 317 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 FZD8Q9H461 694 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 ELAC1Q9H777 363 aaKnown RBP23.49■■□□□ 1.35
ATG4D-212ENST00000590096 TMEM161AQ9NX61 479 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 ADGRA3Q8IWK6 1321 aa23.49■■□□□ 1.35
ATG4D-212ENST00000590096 A0A0U1RQF3 1178 aa23.48■■□□□ 1.35
ATG4D-212ENST00000590096 A0A1B0GVL5 298 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms