RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 LRRC8DQ7L1W4 858 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 ZNF720Q7Z2F6 126 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 SRGAP1Q7Z6B7 1085 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 IFNLR1Q8IU57 520 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-211ENST00000589753 TRIML1Q8N9V2 468 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 TMEM161BQ8NDZ6 487 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 GTPBP4Q9BZE4 634 aaKnown RBP16.73■□□□□ 0.27
ATG4D-211ENST00000589753 ST6GALNAC4Q9H4F1 302 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 PRDM5Q9NQX1 630 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-211ENST00000589753 ARHGAP28Q9P2N2 729 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 PHLPP2Q6ZVD8 1323 aa16.72■□□□□ 0.27
ATG4D-211ENST00000589753 DENND3A2RUS2 1198 aa16.72■□□□□ 0.27
ATG4D-211ENST00000589753 DARSP14868 501 aaKnown RBP16.72■□□□□ 0.27
ATG4D-211ENST00000589753 EIF4BP23588 611 aaKnown RBP16.72■□□□□ 0.27
ATG4D-211ENST00000589753 ABCD1P33897 745 aa16.72■□□□□ 0.27
ATG4D-211ENST00000589753 ALCAMQ13740 583 aa16.72■□□□□ 0.27
ATG4D-211ENST00000589753 MORC3Q14149 939 aa16.72■□□□□ 0.27
ATG4D-211ENST00000589753 TRAF7Q6Q0C0 670 aa16.72■□□□□ 0.27
ATG4D-211ENST00000589753 KIAA0895Q8NCT3 520 aa16.72■□□□□ 0.27
ATG4D-211ENST00000589753 FGFBP2Q9BYJ0 223 aa16.72■□□□□ 0.27
ATG4D-211ENST00000589753 PPP1R12CQ9BZL4 782 aa16.72■□□□□ 0.27
ATG4D-211ENST00000589753 INO80BQ9C086 356 aaPredicted RBP16.72■□□□□ 0.27
ATG4D-211ENST00000589753 TMEM134Q9H6X4 195 aa16.72■□□□□ 0.27
ATG4D-211ENST00000589753 PCDHB13Q9Y5F0 798 aa16.72■□□□□ 0.27
ATG4D-211ENST00000589753 UMODL1Q5DID0 1318 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 ALPK3Q96L96 1907 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 INO80B-WBP1J3KQ70 363 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 K7ERI5 159 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 KIAA0355O15063 1070 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 MYBP10242 640 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 CASP5P51878 434 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 GTF2BQ00403 316 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 MBTD1Q05BQ5 628 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 ZC2HC1CQ53FD0 456 aaPredicted RBP16.71■□□□□ 0.27
ATG4D-211ENST00000589753 C7orf61Q8IZ16 206 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 GLIS3Q8NEA6 775 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 TMEM40Q8WWA1 233 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 KCNN1Q92952 543 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 HVCN1Q96D96 273 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 STRA6Q9BX79 667 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 CCDC113Q9H0I3 377 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 MINDY3Q9H8M7 445 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 GDAQ9Y2T3 454 aa16.71■□□□□ 0.27
ATG4D-211ENST00000589753 TRIM43BA6NCK2 446 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 EIF3DO15371 548 aaKnown RBP eCLIP16.7■□□□□ 0.26
ATG4D-211ENST00000589753 EVI5O60447 810 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 CSDE1O75534 798 aaKnown RBP16.7■□□□□ 0.26
ATG4D-211ENST00000589753 PPP1R37O75864 691 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 IQCF3P0C7M6 154 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 SFPQP23246 707 aaKnown RBP eCLIP16.7■□□□□ 0.26
ATG4D-211ENST00000589753 CYP2C18P33260 490 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 STRN3Q13033 797 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 MAPK6Q16659 721 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 FBXO47Q5MNV8 452 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 SASS6Q6UVJ0 657 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 EPM2AIP1Q7L775 607 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-211ENST00000589753 SMYD4Q8IYR2 804 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-211ENST00000589753 TRIM43Q96BQ3 446 aaPredicted RBP16.7■□□□□ 0.26
ATG4D-211ENST00000589753 WNT8AQ9H1J5 351 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 FZD8Q9H461 694 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 PRKAG2Q9UGJ0 569 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 TBX20Q9UMR3 447 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 SQORQ9Y6N5 450 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 SIP14410 1827 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 UBE4BO95155 1302 aa16.7■□□□□ 0.26
ATG4D-211ENST00000589753 SYCE3A1L190 88 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 RPS6KA5O75582 802 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 ERLIN2O94905 339 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 PRPF6O94906 941 aaKnown RBP16.69■□□□□ 0.26
ATG4D-211ENST00000589753 KIF20AO95235 890 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 PARNO95453 639 aaKnown RBP16.69■□□□□ 0.26
ATG4D-211ENST00000589753 TIMP1P01033 207 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 PRKCBP05771 671 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 GHRP10912 638 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 RAG1P15918 1043 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 BMP6P22004 513 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 CCL23P55773 120 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 NLRP12P59046 1061 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 LPIN1Q14693 890 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 PCBP1Q15365 356 aaKnown RBP eCLIP16.69■□□□□ 0.26
ATG4D-211ENST00000589753 FAM187BQ17R55 369 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 L1TD1Q5T7N2 865 aaKnown RBP16.69■□□□□ 0.26
ATG4D-211ENST00000589753 TSHZ1Q6ZSZ6 1077 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 MYOCDQ8IZQ8 938 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 USP38Q8NB14 1042 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 ZNF507Q8TCN5 953 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 SCFD1Q8WVM8 642 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 DPF3Q92784 378 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 ACCSQ96QU6 501 aa16.69■□□□□ 0.26
ATG4D-211ENST00000589753 PRMT7Q9NVM4 692 aaPredicted RBP16.69■□□□□ 0.26
ATG4D-211ENST00000589753 NOC2LQ9Y3T9 749 aaKnown RBP16.69■□□□□ 0.26
ATG4D-211ENST00000589753 TANC1Q9C0D5 1861 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 FGFR4P22455 802 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 PRCPP42785 496 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 MBTPS1Q14703 1052 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 BMT2Q1RMZ1 405 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 COBLL1Q53SF7 1204 aa16.68■□□□□ 0.26
ATG4D-211ENST00000589753 PPP4R3CPQ6ZMV5 832 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms