RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ADD3Q9UEY8 706 aaKnown RBP9.56□□□□□ -0.88
DNMT1-219ENST00000589349 DDX49Q9Y6V7 483 aaKnown RBP9.56□□□□□ -0.88
DNMT1-219ENST00000589349 ZNF536O15090 1300 aa9.56□□□□□ -0.88
DNMT1-219ENST00000589349 DNAJC25-GNG10A0A024R161 153 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 DCDC2CA8MYV0 355 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 NFIBO00712 420 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 DYNC1LI2O43237 492 aaPredicted RBP9.55□□□□□ -0.88
DNMT1-219ENST00000589349 ZEB2O60315 1214 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 FXR1P51114 621 aaKnown RBP eCLIP9.55□□□□□ -0.88
DNMT1-219ENST00000589349 PTH1RQ03431 593 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 TTLL4Q14679 1199 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 CDC37Q16543 378 aaPredicted RBP9.55□□□□□ -0.88
DNMT1-219ENST00000589349 NFXL1Q6ZNB6 911 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 FBXO16Q8IX29 292 aaPredicted RBP9.55□□□□□ -0.88
DNMT1-219ENST00000589349 SMYD4Q8IYR2 804 aaPredicted RBP9.55□□□□□ -0.88
DNMT1-219ENST00000589349 ENAHQ8N8S7 591 aaPredicted RBP9.55□□□□□ -0.88
DNMT1-219ENST00000589349 PCSK9Q8NBP7 692 aaKnown RBP9.55□□□□□ -0.88
DNMT1-219ENST00000589349 ELMO3Q96BJ8 720 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 CCDC136Q96JN2 1154 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 GLT1D1Q96MS3 346 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 RANBP17Q9H2T7 1088 aaKnown RBP9.55□□□□□ -0.88
DNMT1-219ENST00000589349 CYP39A1Q9NYL5 469 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 PNMA2Q9UL42 364 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 RAD50Q92878 1312 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 SYNRGQ9UMZ2 1314 aa9.55□□□□□ -0.88
DNMT1-219ENST00000589349 RLFQ13129 1914 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 A0A1W2PQ45 241 aaPredicted RBP9.54□□□□□ -0.88
DNMT1-219ENST00000589349 A0A1W2PQY0 241 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 B4DLN1 442 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 RNGTTO60942 597 aaKnown RBP9.54□□□□□ -0.88
DNMT1-219ENST00000589349 DUSP11O75319 330 aaKnown RBP9.54□□□□□ -0.88
DNMT1-219ENST00000589349 RAG1P15918 1043 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 MRPL12P52815 198 aaKnown RBP9.54□□□□□ -0.88
DNMT1-219ENST00000589349 ACLYP53396 1101 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 BEX3Q00994 111 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 TLE2Q04725 743 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 MRPL58Q14197 206 aaKnown RBP9.54□□□□□ -0.88
DNMT1-219ENST00000589349 WTAPQ15007 396 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 CPSF6Q16630 551 aaKnown RBP eCLIP9.54□□□□□ -0.88
DNMT1-219ENST00000589349 ASPRV1Q53RT3 343 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 TMEM67Q5HYA8 995 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 MAMDC4Q6UXC1 1216 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 HOMER1Q86YM7 354 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 ZDHHC13Q8IUH4 622 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 ADGRF4Q8IZF3 695 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 RNF214Q8ND24 703 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 NCOA7Q8NI08 942 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 SHKBP1Q8TBC3 707 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 GAL3ST3Q96A11 431 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 TBC1D32Q96NH3 1257 aa9.54□□□□□ -0.88
DNMT1-219ENST00000589349 A0A0G2JMZ2 1700 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 GREB1LQ9C091 1923 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-219ENST00000589349 ZNFX1Q9P2E3 1918 aaKnown RBP9.53□□□□□ -0.88
DNMT1-219ENST00000589349 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-219ENST00000589349 RBM47A0AV96 593 aaKnown RBP9.53□□□□□ -0.88
DNMT1-219ENST00000589349 MYADML2A6NDP7 307 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 WDR64B1ANS9 1081 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 ASGR1P07306 291 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 NT5C2P49902 561 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 PWP1Q13610 501 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 IQSEC1Q6DN90 963 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 BTNL9Q6UXG8 535 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 SLC30A10Q6XR72 485 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 CYB5R4Q7L1T6 521 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 CENPQQ7L2Z9 268 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-219ENST00000589349 HDXQ7Z353 690 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 CATIPQ7Z7H3 387 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 ZAR1Q86SH2 424 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 TLK2Q86UE8 772 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 SKAP1Q86WV1 359 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 TDHQ8IZJ6 230 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 FBXL6Q8N531 539 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 FAM133AQ8N9E0 248 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 BADQ92934 168 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 WDR11Q9BZH6 1224 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 MIR1-1HGQ9H1L0 117 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 IL25Q9H293 177 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 SSU72Q9NP77 194 aaKnown RBP9.53□□□□□ -0.88
DNMT1-219ENST00000589349 PDGFCQ9NRA1 345 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 PCOLCE2Q9UKZ9 415 aa9.53□□□□□ -0.88
DNMT1-219ENST00000589349 NAP1L2Q9ULW6 460 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-219ENST00000589349 RBM8AQ9Y5S9 174 aaKnown RBP9.53□□□□□ -0.88
DNMT1-219ENST00000589349 SCO2A0A1W2PP80 73 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 KLRF2D3W0D1 207 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 E7EWF7 191 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 TLR3O15455 904 aaKnown RBP9.52□□□□□ -0.89
DNMT1-219ENST00000589349 SGSM2O43147 1006 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 CFBP00751 764 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 MYL3P08590 195 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 CYP21A2P08686 494 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 CLTBP09497 229 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 GRIK1P39086 918 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 NOVP48745 357 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 ALDH5A1P51649 535 aaPredicted RBP9.52□□□□□ -0.89
DNMT1-219ENST00000589349 RPS6P62753 249 aaKnown RBP9.52□□□□□ -0.89
DNMT1-219ENST00000589349 FSCN1Q16658 493 aaKnown RBP9.52□□□□□ -0.89
DNMT1-219ENST00000589349 QRICH1Q2TAL8 776 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 BRDTQ58F21 947 aaPredicted RBP9.52□□□□□ -0.89
DNMT1-219ENST00000589349 FAM47CQ5HY64 1035 aa9.52□□□□□ -0.89
DNMT1-219ENST00000589349 ARHGEF16Q5VV41 709 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms