RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 ZNF623O75123 536 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 ZC3H11AO75152 810 aaKnown RBP eCLIP12.38□□□□□ -0.43
MRPL54-202ENST00000589174 CXCL14O95715 111 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 EFEMP2O95967 443 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 CTSAP10619 480 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 TMOD1P28289 359 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 PPM1AP35813 382 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 SCRN1Q12765 414 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 STK3Q13188 491 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 SMC1AQ14683 1233 aaKnown RBP12.38□□□□□ -0.43
MRPL54-202ENST00000589174 RARS2Q5T160 578 aaKnown RBP12.38□□□□□ -0.43
MRPL54-202ENST00000589174 POTEGQ6S5H5 508 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 MOXD1Q6UVY6 613 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 RHPN2Q8IUC4 686 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 TMEM105Q8N8V8 129 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 KREMEN2Q8NCW0 462 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 RDM1Q8NG50 284 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 PHF20Q9BVI0 1012 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 DHX33Q9H6R0 707 aaKnown RBP12.38□□□□□ -0.43
MRPL54-202ENST00000589174 XPNPEP1Q9NQW7 623 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 BMP2KQ9NSY1 1161 aaPredicted RBP12.38□□□□□ -0.43
MRPL54-202ENST00000589174 MARCH5Q9NX47 278 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 PIN4Q9Y237 131 aaKnown RBP12.38□□□□□ -0.43
MRPL54-202ENST00000589174 IRAK3Q9Y616 596 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 MTCL1Q9Y4B5 1905 aaKnown RBP12.38□□□□□ -0.43
MRPL54-202ENST00000589174 CFAP54Q96N23 3096 aa12.38□□□□□ -0.43
MRPL54-202ENST00000589174 DDX11L8A8MPP1 907 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 HOXB8P17481 243 aaPredicted RBP12.37□□□□□ -0.43
MRPL54-202ENST00000589174 AKAP17AQ02040 695 aaKnown RBP12.37□□□□□ -0.43
MRPL54-202ENST00000589174 SSRP1Q08945 709 aaKnown RBP12.37□□□□□ -0.43
MRPL54-202ENST00000589174 PPP2R5CQ13362 524 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 PTPN14Q15678 1187 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 TAS1R1Q7RTX1 841 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 DDX53Q86TM3 631 aaKnown RBP12.37□□□□□ -0.43
MRPL54-202ENST00000589174 ZNF410Q86VK4 478 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 ABI1Q8IZP0 508 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 SMG8Q8ND04 991 aaKnown RBP12.37□□□□□ -0.43
MRPL54-202ENST00000589174 CASP10Q92851 521 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 TMEM143Q96AN5 459 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 ZNF274Q96GC6 653 aaPredicted RBP12.37□□□□□ -0.43
MRPL54-202ENST00000589174 RIPOR3Q96MK2 946 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 NLRP4Q96MN2 994 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 SCLT1Q96NL6 688 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 GCOM2Q9BZD3 368 aaPredicted RBP12.37□□□□□ -0.43
MRPL54-202ENST00000589174 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 CYP26B1Q9NR63 512 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 CHST12Q9NRB3 414 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 AGPAT5Q9NUQ2 364 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 MIOSQ9NXC5 875 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 RGL1Q9NZL6 768 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 DDX25Q9UHL0 483 aaKnown RBP12.37□□□□□ -0.43
MRPL54-202ENST00000589174 PUF60Q9UHX1 559 aaKnown RBP12.37□□□□□ -0.43
MRPL54-202ENST00000589174 INPP5FQ9Y2H2 1132 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 COL4A3Q01955 1670 aa12.37□□□□□ -0.43
MRPL54-202ENST00000589174 VPS13AQ96RL7 3174 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.36□□□□□ -0.43
MRPL54-202ENST00000589174 N4BP1O75113 896 aaKnown RBP12.36□□□□□ -0.43
MRPL54-202ENST00000589174 DEXIO95424 95 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 LARGE1O95461 756 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 PSMC5P62195 406 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 KRT17Q04695 432 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 LETM2Q2VYF4 491 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 NOMO2Q5JPE7 1267 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 TWF2Q6IBS0 349 aaKnown RBP12.36□□□□□ -0.43
MRPL54-202ENST00000589174 KIAA1841Q6NSI8 718 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 MRPL10Q7Z7H8 261 aaKnown RBP12.36□□□□□ -0.43
MRPL54-202ENST00000589174 POTEDQ86YR6 584 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 RNF168Q8IYW5 571 aaPredicted RBP12.36□□□□□ -0.43
MRPL54-202ENST00000589174 TNFRSF25Q93038 417 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 TSHZ2Q9NRE2 1034 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
MRPL54-202ENST00000589174 DACT1Q9NYF0 836 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 TCEAL9Q9UHQ7 104 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 TPCN1Q9ULQ1 816 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 PCDHB2Q9Y5E7 798 aa12.36□□□□□ -0.43
MRPL54-202ENST00000589174 VWA8A3KMH1 1905 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 A0A087WWV3 80 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 H0Y858 1186 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 CNPP09543 421 aaKnown RBP12.35□□□□□ -0.43
MRPL54-202ENST00000589174 FDPSP14324 419 aaKnown RBP12.35□□□□□ -0.43
MRPL54-202ENST00000589174 PSMA5P28066 241 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 PTPN5P54829 565 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 ST3GAL1Q11201 340 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 NONOQ15233 471 aaKnown RBP eCLIP12.35□□□□□ -0.43
MRPL54-202ENST00000589174 AMHR2Q16671 573 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 CWF19L1Q69YN2 538 aaKnown RBP12.35□□□□□ -0.43
MRPL54-202ENST00000589174 TMC5Q6UXY8 1006 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 CATSPER4Q7RTX7 472 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 ZNF710Q8N1W2 664 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 PRPF31Q8WWY3 499 aaKnown RBP12.35□□□□□ -0.43
MRPL54-202ENST00000589174 TMEM169Q96HH4 297 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 KLHL5Q96PQ7 755 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 EIF2AQ9BY44 585 aaKnown RBP12.35□□□□□ -0.43
MRPL54-202ENST00000589174 MRPL9Q9BYD2 267 aaKnown RBP12.35□□□□□ -0.43
MRPL54-202ENST00000589174 TM6SF1Q9BZW5 370 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 GBP3Q9H0R5 595 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 LIMD1Q9UGP4 676 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 COL4A3BPQ9Y5P4 624 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 DCHS1Q96JQ0 3298 aa12.35□□□□□ -0.43
MRPL54-202ENST00000589174 NOTCH4Q99466 2003 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms