RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 CDCA2Q69YH5 1023 aaPredicted RBP11.66□□□□□ -0.54
TPM4-209ENST00000588483 DTHD1Q6ZMT9 781 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 MRPL10Q7Z7H8 261 aaKnown RBP11.66□□□□□ -0.54
TPM4-209ENST00000588483 LRRC43Q8N309 656 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 PPM1EQ8WY54 764 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 CCDC51Q96ER9 411 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 MMTAG2Q9BU76 263 aaKnown RBP11.66□□□□□ -0.54
TPM4-209ENST00000588483 CWH43Q9H720 699 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 BMP2KQ9NSY1 1161 aaPredicted RBP11.66□□□□□ -0.54
TPM4-209ENST00000588483 FAM105AQ9NUU6 356 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 DAXXQ9UER7 740 aaPredicted RBP11.66□□□□□ -0.54
TPM4-209ENST00000588483 PLAGL2Q9UPG8 496 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 PLXNA4Q9HCM2 1894 aa11.66□□□□□ -0.54
TPM4-209ENST00000588483 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.65□□□□□ -0.54
TPM4-209ENST00000588483 GRM6O15303 877 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 SLC26A4O43511 780 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 USO1O60763 962 aaKnown RBP11.65□□□□□ -0.54
TPM4-209ENST00000588483 BMP15O95972 392 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 ITGB1P05556 798 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 LAG3P18627 525 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 CCT6AP40227 531 aaKnown RBP11.65□□□□□ -0.54
TPM4-209ENST00000588483 MRPS5P82675 430 aaKnown RBP11.65□□□□□ -0.54
TPM4-209ENST00000588483 UBE3AQ05086 875 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 MBTD1Q05BQ5 628 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 FAM187BQ17R55 369 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 KRT79Q5XKE5 535 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 TWF2Q6IBS0 349 aaKnown RBP11.65□□□□□ -0.54
TPM4-209ENST00000588483 PADI6Q6TGC4 694 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 PPP4R3CPQ6ZMV5 832 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 LRRC55Q6ZSA7 311 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 MICALL1Q8N3F8 863 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 KLHL23Q8NBE8 558 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 SPPL3Q8TCT6 385 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 SNX29Q8TEQ0 813 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 PRIMPOLQ96LW4 560 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 ASB2Q96Q27 587 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 MRPL9Q9BYD2 267 aaKnown RBP11.65□□□□□ -0.54
TPM4-209ENST00000588483 POLR3FQ9H1D9 316 aaPredicted RBP11.65□□□□□ -0.54
TPM4-209ENST00000588483 NSUN3Q9H649 340 aaKnown RBP11.65□□□□□ -0.54
TPM4-209ENST00000588483 AAASQ9NRG9 546 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 TYW1Q9NV66 732 aaKnown RBP11.65□□□□□ -0.54
TPM4-209ENST00000588483 LZTS1Q9Y250 596 aa11.65□□□□□ -0.54
TPM4-209ENST00000588483 MORC2Q9Y6X9 1032 aaPredicted RBP11.65□□□□□ -0.54
TPM4-209ENST00000588483 ZMYM2Q9UBW7 1377 aa11.65□□□□□ -0.55
TPM4-209ENST00000588483 BDP1A6H8Y1 2624 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 ARHGEF35A5YM69 484 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 CARNS1A5YM72 827 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 INPPL1O15357 1258 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 TSPAN1O60635 241 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 EYA4O95677 639 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 SYT1P21579 422 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 PLCB3Q01970 1234 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 AAK1Q2M2I8 961 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 UBXN11Q5T124 520 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 NOTUMQ6P988 496 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 COLGALT1Q8NBJ5 622 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 CNNM3Q8NE01 707 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 SYMPKQ92797 1274 aaKnown RBP11.64□□□□□ -0.55
TPM4-209ENST00000588483 HLA-CQ95604 372 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 AK8Q96MA6 479 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 BHMT2Q9H2M3 363 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 GPRC5CQ9NQ84 441 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 DDX19AQ9NUU7 478 aaKnown RBP11.64□□□□□ -0.55
TPM4-209ENST00000588483 KIAA1024Q9UPX6 916 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 PCDHB12Q9Y5F1 795 aa11.64□□□□□ -0.55
TPM4-209ENST00000588483 CNTNAP2Q9UHC6 1331 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 A0A087WWV3 80 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 NCK2O43639 380 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 ERLIN2O94905 339 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 NCLP19338 710 aaKnown RBP11.63□□□□□ -0.55
TPM4-209ENST00000588483 DNAJB1P25685 340 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 PPM1AP35813 382 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 NAMPTP43490 491 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 ABI1Q8IZP0 508 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 HELQQ8TDG4 1101 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 KIFAP3Q92845 792 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 PGBD4Q96DM1 585 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 COL25A1Q9BXS0 654 aaPredicted RBP11.63□□□□□ -0.55
TPM4-209ENST00000588483 CCDC113Q9H0I3 377 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 NT5C3AQ9H0P0 336 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 C2orf40Q9H1Z8 148 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 FZD8Q9H461 694 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 PRMT7Q9NVM4 692 aaPredicted RBP11.63□□□□□ -0.55
TPM4-209ENST00000588483 HCSTQ9UBK5 93 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 DNM3Q9UQ16 869 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 PCDHB2Q9Y5E7 798 aa11.63□□□□□ -0.55
TPM4-209ENST00000588483 A0A1B0GUA9 196 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 VWA3AA6NCI4 1184 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 PP2D1A8MPX8 630 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 INO80B-WBP1J3KQ70 363 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 FSCN2O14926 492 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 OFD1O75665 1012 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 FGF18O76093 207 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 ARF4P18085 180 aaPredicted RBP11.62□□□□□ -0.55
TPM4-209ENST00000588483 CDC25AP30304 524 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 NCBP1Q09161 790 aaKnown RBP11.62□□□□□ -0.55
TPM4-209ENST00000588483 RESTQ13127 1097 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 PPP2R5AQ15172 486 aa11.62□□□□□ -0.55
TPM4-209ENST00000588483 SKIV2LQ15477 1246 aaKnown RBP11.62□□□□□ -0.55
TPM4-209ENST00000588483 CTC1Q2NKJ3 1217 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms