RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 STRN3Q13033 797 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 MAPK7Q13164 816 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 PSMD2Q13200 908 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 SNW1Q13573 536 aaKnown RBP10□□□□□ -0.81
CIRBP-218ENST00000588344 GPNMBQ14956 572 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 HERC4Q5GLZ8 1057 aaPredicted RBP10□□□□□ -0.81
CIRBP-218ENST00000588344 TMEM240Q5SV17 173 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 PRPF38BQ5VTL8 546 aaKnown RBP10□□□□□ -0.81
CIRBP-218ENST00000588344 PPP4R3CPQ6ZMV5 832 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 ZNF365Q70YC5 407 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 CATSPER4Q7RTX7 472 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 APBB1IPQ7Z5R6 666 aaPredicted RBP10□□□□□ -0.81
CIRBP-218ENST00000588344 FAM178BQ8IXR5 827 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 DAW1Q8N136 415 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 DBF4BQ8NFT6 615 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 PHOSPHO2Q8TCD6 241 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 ASAP3Q8TDY4 903 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 HERVK_113Q902F9 699 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 DNAJC19Q96DA6 116 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 CCDC51Q96ER9 411 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 TRAIPQ9BWF2 469 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 FZD8Q9H461 694 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 ST6GALNAC4Q9H4F1 302 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 ZHX3Q9H4I2 956 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 AGO3Q9H9G7 860 aaKnown RBP10□□□□□ -0.81
CIRBP-218ENST00000588344 ERVK-5Q9HDB9 667 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 OLFML3Q9NRN5 406 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 C1orf112Q9NSG2 853 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 PANK4Q9NVE7 773 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 NOC2LQ9Y3T9 749 aaKnown RBP10□□□□□ -0.81
CIRBP-218ENST00000588344 PCDHB13Q9Y5F0 798 aa10□□□□□ -0.81
CIRBP-218ENST00000588344 NPHP3-ACAD11A0A0J9YXS1 232 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 DENND3A2RUS2 1198 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 SFI1A8K8P3 1242 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 INO80B-WBP1J3KQ70 363 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 ACKR2O00590 384 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 GTPBP6O43824 516 aaPredicted RBP9.99□□□□□ -0.81
CIRBP-218ENST00000588344 SMC2O95347 1197 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 IDEP14735 1019 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 CD52P31358 61 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 AFMP43652 599 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 ASIC1P78348 528 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 MBTD1Q05BQ5 628 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 RAD51AP2Q09MP3 1159 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 UNC13DQ70J99 1090 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 C16orf59Q7L2K0 433 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 ZNF720Q7Z2F6 126 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 FAM228AQ86W67 206 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 TMEM40Q8WWA1 233 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 RSPH1Q8WYR4 309 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 HVCN1Q96D96 273 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 GOLPH3LQ9H4A5 285 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 RGS18Q9NS28 235 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 LMBRD1Q9NUN5 540 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 RMND1Q9NWS8 449 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 ARHGAP28Q9P2N2 729 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 DOCK5Q9H7D0 1870 aa9.99□□□□□ -0.81
CIRBP-218ENST00000588344 A0A1B0GUA9 196 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 ENPP3O14638 875 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 SLC16A4O15374 487 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 GADD45BO75293 160 aaPredicted RBP9.98□□□□□ -0.81
CIRBP-218ENST00000588344 NR1I2O75469 434 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 KIF20AO95235 890 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 MBD3O95983 291 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 AMHP03971 560 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 ACRP10323 421 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 KCNJ6P48051 423 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 NCKAP1LP55160 1127 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 PRPF4BQ13523 1007 aaKnown RBP9.98□□□□□ -0.81
CIRBP-218ENST00000588344 POSTNQ15063 836 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 TPRNQ4KMQ1 711 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 NOTUMQ6P988 496 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 SLC24A5Q71RS6 500 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 OTOP2Q7RTS6 562 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 HAUS6Q7Z4H7 955 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 HACE1Q8IYU2 909 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 TMEM161BQ8NDZ6 487 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 BSNDQ8WZ55 320 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 STAMQ92783 540 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 VWCEQ96DN2 955 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 GSDMAQ96QA5 445 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 PPP1R16BQ96T49 567 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.98□□□□□ -0.819e-13■■□□□ 11.8
CIRBP-218ENST00000588344 TSPYL2Q9H2G4 693 aaPredicted RBP9.98□□□□□ -0.81
CIRBP-218ENST00000588344 ELAC1Q9H777 363 aaKnown RBP9.98□□□□□ -0.81
CIRBP-218ENST00000588344 TMEM206Q9H813 350 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 MINDY3Q9H8M7 445 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 MRPL44Q9H9J2 332 aaKnown RBP9.98□□□□□ -0.81
CIRBP-218ENST00000588344 AGPAT5Q9NUQ2 364 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 EXOC7Q9UPT5 735 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 SLC4A7Q9Y6M7 1214 aa9.98□□□□□ -0.81
CIRBP-218ENST00000588344 A0A0U1RQF3 1178 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 N4BP3O15049 544 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 ZNF623O75123 536 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 EOMESO95936 686 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 RPN1P04843 607 aaKnown RBP9.97□□□□□ -0.81
CIRBP-218ENST00000588344 PRKCBP05771 671 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 STAG3L1P0CL83 205 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 LIG1P18858 919 aa9.97□□□□□ -0.81
CIRBP-218ENST00000588344 RAB27AP51159 221 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms