RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 TMEM60Q9H2L4 133 aa13.76□□□□□ -0.21
ERCC2-207ENST00000586441 NSUN3Q9H649 340 aaKnown RBP13.76□□□□□ -0.21
ERCC2-207ENST00000586441 GDPD2Q9HCC8 539 aa13.76□□□□□ -0.21
ERCC2-207ENST00000586441 DBR1Q9UK59 544 aaKnown RBP13.76□□□□□ -0.21
ERCC2-207ENST00000586441 PCDHB12Q9Y5F1 795 aa13.76□□□□□ -0.21
ERCC2-207ENST00000586441 MRPL42Q9Y6G3 142 aaKnown RBP13.76□□□□□ -0.21
ERCC2-207ENST00000586441 MYO7AQ13402 2215 aa13.76□□□□□ -0.21
ERCC2-207ENST00000586441 SPATA31C1P0DKV0 1188 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 AXLP30530 894 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 PRPHP41219 470 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 RARRES1P49788 294 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERCC2-207ENST00000586441 CYP4A11Q02928 519 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 LAMTOR4Q0VGL1 99 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 EMC2Q15006 297 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 PUS10Q3MIT2 529 aaKnown RBP13.75□□□□□ -0.21
ERCC2-207ENST00000586441 CCDC183Q5T5S1 534 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 FERMT3Q86UX7 667 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 CATSPER3Q86XQ3 398 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 KCTD17Q8N5Z5 321 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 C4orf32Q8N8J7 132 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 NACC1Q96RE7 527 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 MTRQ99707 1265 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 SH2D3AQ9BRG2 576 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 RAB34Q9BZG1 259 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 TMEM63CQ9P1W3 806 aa13.75□□□□□ -0.21
ERCC2-207ENST00000586441 TCHHQ07283 1943 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 ARID2Q68CP9 1835 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 GOLGA6L4A6NEF3 574 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 TBKBP1A7MCY6 615 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 GRM6O15303 877 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 LAG3P18627 525 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 ARL2P36404 184 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 TECP42680 631 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 PHKA2P46019 1235 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 FOSBP53539 338 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 TFDP1Q14186 410 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 ZNF174Q15697 407 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 RILPL1Q5EBL4 403 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 FAM102BQ5T8I3 360 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 HAUS3Q68CZ6 603 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 LRSAM1Q6UWE0 723 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 ABI1Q8IZP0 508 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 SPPL3Q8TCT6 385 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 PPP2R3CQ969Q6 453 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 PABPC5Q96DU9 382 aaKnown RBP13.74□□□□□ -0.21
ERCC2-207ENST00000586441 SPATA32Q96LK8 384 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 CASD1Q96PB1 797 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 MRPL9Q9BYD2 267 aaKnown RBP13.74□□□□□ -0.21
ERCC2-207ENST00000586441 AGPAT5Q9NUQ2 364 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 LZTS1Q9Y250 596 aa13.74□□□□□ -0.21
ERCC2-207ENST00000586441 POTEMA6NI47 508 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 RBAK-RBAKDNI3L0D1 243 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 ZBTB39O15060 712 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 GADD45BO75293 160 aaPredicted RBP13.73□□□□□ -0.21
ERCC2-207ENST00000586441 ITGB1P05556 798 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 ATP2B1P20020 1258 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 PPM1AP35813 382 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 TOB1P50616 345 aaPredicted RBP13.73□□□□□ -0.21
ERCC2-207ENST00000586441 PTENP60484 403 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 PLCB3Q01970 1234 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 NCBP1Q09161 790 aaKnown RBP13.73□□□□□ -0.21
ERCC2-207ENST00000586441 LEXMQ3ZCV2 418 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 CATSPER4Q7RTX7 472 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 BRAPQ7Z569 592 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 KSR1Q8IVT5 923 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 LRRC43Q8N309 656 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 IGSF22Q8N9C0 903 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 KLHL23Q8NBE8 558 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 CNNM3Q8NE01 707 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 MCPH1Q8NEM0 835 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 ANP32BQ92688 251 aaKnown RBP13.73□□□□□ -0.21
ERCC2-207ENST00000586441 TMEM143Q96AN5 459 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 PGBD4Q96DM1 585 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 NLRP4Q96MN2 994 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 CWH43Q9H720 699 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 UBE2ZQ9H832 354 aaPredicted RBP13.73□□□□□ -0.21
ERCC2-207ENST00000586441 XPNPEP1Q9NQW7 623 aa13.73□□□□□ -0.21
ERCC2-207ENST00000586441 TYW1Q9NV66 732 aaKnown RBP13.73□□□□□ -0.21
ERCC2-207ENST00000586441 KIAA1671Q9BY89 1806 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 VCANP13611 3396 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 SRGAP2CP0DJJ0 459 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 FGFR1P11362 822 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 PTGDRQ13258 359 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 CAMK1Q14012 370 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 CTC1Q2NKJ3 1217 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 PAN2Q504Q3 1202 aaKnown RBP13.72□□□□□ -0.21
ERCC2-207ENST00000586441 TWF2Q6IBS0 349 aaKnown RBP13.72□□□□□ -0.21
ERCC2-207ENST00000586441 MRPL10Q7Z7H8 261 aaKnown RBP13.72□□□□□ -0.21
ERCC2-207ENST00000586441 GAS2L3Q86XJ1 694 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 RNF149Q8NC42 400 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 CCDC51Q96ER9 411 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 ZNF668Q96K58 619 aaPredicted RBP13.72□□□□□ -0.21
ERCC2-207ENST00000586441 CCDC43Q96MW1 224 aaKnown RBP13.72□□□□□ -0.21
ERCC2-207ENST00000586441 FAM105AQ9NUU6 356 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 RNF19AQ9NV58 838 aa13.72□□□□□ -0.21
ERCC2-207ENST00000586441 PUF60Q9UHX1 559 aaKnown RBP13.72□□□□□ -0.21
ERCC2-207ENST00000586441 MED24O75448 989 aa13.71□□□□□ -0.21
ERCC2-207ENST00000586441 CSDE1O75534 798 aaKnown RBP13.71□□□□□ -0.21
ERCC2-207ENST00000586441 FGF18O76093 207 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms