RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 ATP11AP98196 1134 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 PRR5LQ6MZQ0 368 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 ZNF572Q7Z3I7 529 aaPredicted RBP11.35□□□□□ -0.59
TOP3A-214ENST00000582981 PHLDB2Q86SQ0 1253 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 LONP2Q86WA8 852 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 CERS5Q8N5B7 392 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 ARHGEF26Q96DR7 871 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 PSMD1Q99460 953 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 PPP1R12CQ9BZL4 782 aa11.35□□□□□ -0.59
TOP3A-214ENST00000582981 LUC7LQ9NQ29 371 aaKnown RBP11.35□□□□□ -0.59
TOP3A-214ENST00000582981 SRRM3A6NNA2 597 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-214ENST00000582981 PGRMC1O00264 195 aaKnown RBP11.34□□□□□ -0.59
TOP3A-214ENST00000582981 KRT16P08779 473 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 PPP1R2P41236 205 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 GALCP54803 685 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 PLTPP55058 493 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 CCDC25Q86WR0 208 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 TPCN2Q8NHX9 752 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 TMX4Q9H1E5 349 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-214ENST00000582981 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-214ENST00000582981 SLC12A4Q9UP95 1085 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-214ENST00000582981 ROBO3Q96MS0 1386 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 LAMB1P07942 1786 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 CFAP73A6NFT4 308 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 FAM86B1E9PN63 330 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 TTLL1O95922 423 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 CALCAP01258 141 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 AFPP02771 609 aaKnown RBP11.34□□□□□ -0.59
TOP3A-214ENST00000582981 FAM86B2P0C5J1 330 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 RIPK1Q13546 671 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 LRRC23Q53EV4 343 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-214ENST00000582981 KIAA0825Q8IV33 1275 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 MGARPQ8TDB4 240 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 MTFR1LQ9H019 292 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 CHCHD3Q9NX63 227 aaKnown RBP11.34□□□□□ -0.59
TOP3A-214ENST00000582981 SERPINB13Q9UIV8 391 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 PTPN22Q9Y2R2 807 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 MYH7BA7E2Y1 1941 aa11.34□□□□□ -0.59
TOP3A-214ENST00000582981 EML1O00423 815 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 H2AFZP0C0S5 128 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 USP11P51784 963 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 GIT2Q14161 759 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 PDIA5Q14554 519 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 ZNF268Q14587 947 aaPredicted RBP11.33□□□□□ -0.59
TOP3A-214ENST00000582981 ZYXQ15942 572 aaKnown RBP11.33□□□□□ -0.59
TOP3A-214ENST00000582981 HHATQ5VTY9 493 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 H2AFVQ71UI9 128 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 SPATA21Q7Z572 469 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 ARHGAP22Q7Z5H3 698 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 TPH2Q8IWU9 490 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 LNX1Q8TBB1 728 aaPredicted RBP11.33□□□□□ -0.59
TOP3A-214ENST00000582981 BTBD6Q96KE9 485 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 PCIF1Q9H4Z3 704 aa11.33□□□□□ -0.59
TOP3A-214ENST00000582981 RBAK-RBAKDNI3L0D1 243 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 ZBTB5O15062 677 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 HIP1RO75146 1068 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 NR3C1P04150 777 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 OTUD6AQ7L8S5 288 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 PRMT1Q99873 361 aaKnown RBP11.33□□□□□ -0.6
TOP3A-214ENST00000582981 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.33□□□□□ -0.6
TOP3A-214ENST00000582981 SHMT1P34896 483 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 ZNF76P36508 570 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 SCNN1BP51168 640 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 ARHGAP4P98171 946 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 SEPT2Q15019 361 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 ASPRV1Q53RT3 343 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 RNF220Q5VTB9 566 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 LMNTD2Q8IXW0 634 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 PROM2Q8N271 834 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 LRRC57Q8N9N7 239 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 TBC1D16Q8TBP0 767 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 DYDC1Q8WWB3 177 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 SPATA31A5Q5VU36 1347 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 SPATA31A7Q8IWB4 1347 aa11.33□□□□□ -0.6
TOP3A-214ENST00000582981 CCDC88AQ3V6T2 1871 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 GOLGA6L10A0A0M3HER8 536 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 A6NHS1 94 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 H0Y3Z8 333 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 EEF2P13639 858 aaKnown RBP11.32□□□□□ -0.6
TOP3A-214ENST00000582981 KCNJ1P48048 391 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 SLC12A3P55017 1021 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 KNOP1Q1ED39 458 aaKnown RBP11.32□□□□□ -0.6
TOP3A-214ENST00000582981 TMEM154Q6P9G4 183 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 LRIG3Q6UXM1 1119 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 MYCT1Q8N699 235 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 SLC20A1Q8WUM9 679 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 ISCUQ9H1K1 167 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 DBNDD1Q9H9R9 158 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 DDX60LQ5H9U9 1706 aaKnown RBP11.32□□□□□ -0.6
TOP3A-214ENST00000582981 ESYT2A0FGR8 921 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 H0YGN5 161 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 RNF8O76064 485 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 FGFR4P22455 802 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 MSH2P43246 934 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 NCALDP61601 193 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 LRRC14Q15048 493 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 CBWD6Q4V339 395 aa11.32□□□□□ -0.6
TOP3A-214ENST00000582981 CBWD3Q5JTY5 395 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms