RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 GPR142Q7Z601 462 aa15.99■□□□□ 0.15
MKS1-211ENST00000581761 PLEKHH3Q7Z736 793 aa15.99■□□□□ 0.15
MKS1-211ENST00000581761 MAP4K3Q8IVH8 894 aa15.99■□□□□ 0.15
MKS1-211ENST00000581761 SCFD2Q8WU76 684 aa15.99■□□□□ 0.15
MKS1-211ENST00000581761 COPS5Q92905 334 aa15.99■□□□□ 0.15
MKS1-211ENST00000581761 SLC35C1Q96A29 364 aa15.99■□□□□ 0.15
MKS1-211ENST00000581761 SPATA33Q96N06 139 aa15.99■□□□□ 0.15
MKS1-211ENST00000581761 PCIF1Q9H4Z3 704 aa15.99■□□□□ 0.15
MKS1-211ENST00000581761 VTA1Q9NP79 307 aa15.99■□□□□ 0.15
MKS1-211ENST00000581761 PDGFCQ9NRA1 345 aa15.99■□□□□ 0.15
MKS1-211ENST00000581761 DIS3Q9Y2L1 958 aaKnown RBP15.99■□□□□ 0.15
MKS1-211ENST00000581761 PAXBP1Q9Y5B6 917 aa15.99■□□□□ 0.15
MKS1-211ENST00000581761 EPN1Q9Y6I3 576 aaPredicted RBP15.99■□□□□ 0.15
MKS1-211ENST00000581761 LRRC53A6NM62 1247 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 TISP43B9A030 160 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 KRT13P13646 458 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 CDK17Q00537 523 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 KIF22Q14807 665 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 SYT10Q6XYQ8 523 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 GBP6Q6ZN66 633 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 ZNF467Q7Z7K2 595 aaPredicted RBP15.98■□□□□ 0.15
MKS1-211ENST00000581761 KIF18AQ8NI77 898 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 BAP1Q92560 729 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 GLG1Q92896 1179 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 CBWD1Q9BRT8 395 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 GANQ9H2C0 597 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 DHX33Q9H6R0 707 aaKnown RBP15.98■□□□□ 0.15
MKS1-211ENST00000581761 HSPBP1Q9NZL4 362 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 KCNG1Q9UIX4 513 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 GABRQQ9UN88 632 aa15.98■□□□□ 0.15
MKS1-211ENST00000581761 MCM3APO60318 1980 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 NOL4O94818 638 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 NDUFA10O95299 355 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 MAPK4P31152 587 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 HNRNPH3P31942 346 aaKnown RBP15.97■□□□□ 0.15
MKS1-211ENST00000581761 FCGRTP55899 365 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 POLR2FP61218 127 aaKnown RBP15.97■□□□□ 0.15
MKS1-211ENST00000581761 PRKCZQ05513 592 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 GRB14Q14449 540 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 PPP2R5AQ15172 486 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 EXOC3L4Q17RC7 722 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 DPP9Q86TI2 863 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 CCDC170Q8IYT3 715 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 XXYLT1Q8NBI6 393 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 ASAP3Q8TDY4 903 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 SLC7A3Q8WY07 619 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 TMEM143Q96AN5 459 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 CEP89Q96ST8 783 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 NTPCRQ9BSD7 190 aaKnown RBP15.97■□□□□ 0.15
MKS1-211ENST00000581761 NUCKS1Q9H1E3 243 aaKnown RBP15.97■□□□□ 0.15
MKS1-211ENST00000581761 NLRC4Q9NPP4 1024 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.97■□□□□ 0.15
MKS1-211ENST00000581761 SRRDQ9UH36 339 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 GJD2Q9UKL4 321 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 PPME1Q9Y570 386 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 PTCH2Q9Y6C5 1203 aa15.97■□□□□ 0.15
MKS1-211ENST00000581761 EMSYQ7Z589 1322 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 UQCRHLA0A096LP55 91 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 ANKRD63C9JTQ0 380 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 RIOK3O14730 519 aaKnown RBP15.96■□□□□ 0.15
MKS1-211ENST00000581761 TNPO2O14787 897 aaKnown RBP15.96■□□□□ 0.15
MKS1-211ENST00000581761 GNRH1P01148 92 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 UQCRHP07919 91 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 SLC9A1P19634 815 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 MARK3P27448 753 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 ABCD1P33897 745 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 ARL2P36404 184 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 FMO5P49326 533 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 ETF1P62495 437 aaKnown RBP15.96■□□□□ 0.15
MKS1-211ENST00000581761 APBA1Q02410 837 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 BFSP1Q12934 665 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 TARBP2Q15633 366 aaKnown RBP15.96■□□□□ 0.15
MKS1-211ENST00000581761 HSDL1Q3SXM5 330 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 SFMBT2Q5VUG0 894 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 TRIM65Q6PJ69 517 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 INTS8Q75QN2 995 aaKnown RBP15.96■□□□□ 0.15
MKS1-211ENST00000581761 PLPPR4Q7Z2D5 763 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 RDH13Q8NBN7 331 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 MYRIPQ8NFW9 859 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 ATP8B4Q8TF62 1192 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 TMEM174Q8WUU8 243 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 BBXQ8WY36 941 aaPredicted RBP15.96■□□□□ 0.15
MKS1-211ENST00000581761 NHEJ1Q9H9Q4 299 aaPredicted RBP15.96■□□□□ 0.15
MKS1-211ENST00000581761 PLCB1Q9NQ66 1216 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 GCNT4Q9P109 453 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 PLAGL2Q9UPG8 496 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 PLXNA1Q9UIW2 1896 aa15.96■□□□□ 0.15
MKS1-211ENST00000581761 PHLPP2Q6ZVD8 1323 aa15.95■□□□□ 0.14
MKS1-211ENST00000581761 ADGRA3Q8IWK6 1321 aa15.95■□□□□ 0.14
MKS1-211ENST00000581761 BRCA2P51587 3418 aa15.95■□□□□ 0.14
MKS1-211ENST00000581761 RBM47A0AV96 593 aaKnown RBP15.95■□□□□ 0.14
MKS1-211ENST00000581761 GTPBP10A4D1E9 387 aaKnown RBP15.95■□□□□ 0.14
MKS1-211ENST00000581761 SLC15A5A6NIM6 579 aa15.95■□□□□ 0.14
MKS1-211ENST00000581761 MAPK13O15264 365 aa15.95■□□□□ 0.14
MKS1-211ENST00000581761 MAFO75444 373 aaPredicted RBP15.95■□□□□ 0.14
MKS1-211ENST00000581761 GH1P01241 217 aa15.95■□□□□ 0.14
MKS1-211ENST00000581761 TRIM49P0CI25 452 aa15.95■□□□□ 0.14
MKS1-211ENST00000581761 TRIM49CP0CI26 452 aa15.95■□□□□ 0.14
MKS1-211ENST00000581761 ACTN1P12814 892 aa15.95■□□□□ 0.14
MKS1-211ENST00000581761 GLRA2P23416 452 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms