RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 IGSF21Q96ID5 467 aa12.14□□□□□ -0.47
TOP3A-210ENST00000580713 KLHL5Q96PQ7 755 aa12.14□□□□□ -0.47
TOP3A-210ENST00000580713 GBP3Q9H0R5 595 aa12.14□□□□□ -0.47
TOP3A-210ENST00000580713 ARHGEF3Q9NR81 526 aa12.14□□□□□ -0.47
TOP3A-210ENST00000580713 IGKV6D-21A0A0A0MT36 114 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 DCDC2BA2VCK2 349 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 CARNS1A5YM72 827 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 ZBTB42B2RXF5 422 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 SLC27A2O14975 620 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 N4BP1O75113 896 aaKnown RBP12.13□□□□□ -0.47
TOP3A-210ENST00000580713 PLEKHA8P1O95397 391 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 CCNE2O96020 404 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 MYBP10242 640 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 EIF4BP23588 611 aaKnown RBP12.13□□□□□ -0.47
TOP3A-210ENST00000580713 TMOD1P28289 359 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 SMARCA1P28370 1054 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 CLCN4P51793 760 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 PTPN14Q15678 1187 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 CEP55Q53EZ4 464 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 EFCAB12Q6NXP0 572 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 DCLRE1AQ6PJP8 1040 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 HEATR3Q7Z4Q2 680 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 ZNF598Q86UK7 904 aaKnown RBP12.13□□□□□ -0.47
TOP3A-210ENST00000580713 ZNF654Q8IZM8 581 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 CMTR1Q8N1G2 835 aaKnown RBP12.13□□□□□ -0.47
TOP3A-210ENST00000580713 SRBD1Q8N5C6 995 aaKnown RBP12.13□□□□□ -0.47
TOP3A-210ENST00000580713 NCOA7Q8NI08 942 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 BCL7CQ8WUZ0 217 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-210ENST00000580713 PGBD1Q96JS3 809 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 TMEM121BQ9BXQ6 578 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-210ENST00000580713 DACT1Q9NYF0 836 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 DLGAP2Q9P1A6 1054 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 TCEAL9Q9UHQ7 104 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 INPP5FQ9Y2H2 1132 aa12.13□□□□□ -0.47
TOP3A-210ENST00000580713 CCDC195A0A1B0GUA6 201 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 POTEMA6NI47 508 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 PRR5-ARHGAP8B1AHC4 643 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 MAGEB2O15479 319 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 LAMTOR5O43504 91 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 DDAH1O94760 285 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 GALTP07902 379 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 CNPP09543 421 aaKnown RBP12.12□□□□□ -0.47
TOP3A-210ENST00000580713 ATP4AP20648 1035 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 ARHGAP8P85298 464 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 ELMSAN1Q6PJG2 1045 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 GLB1LQ6UWU2 654 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 NFXL1Q6ZNB6 911 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 LRRC71Q8N4P6 559 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 CCDC82Q8N4S0 544 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 ATRIPQ8WXE1 791 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 KCNB2Q92953 911 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 NXPE3Q969Y0 559 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 MYADMQ96S97 322 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 MAP3K14Q99558 947 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 KIF2CQ99661 725 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 FOXQ1Q9C009 403 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 ADAMTS10Q9H324 1103 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 NRDE2Q9H7Z3 1164 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 WDR6Q9NNW5 1121 aaKnown RBP12.12□□□□□ -0.47
TOP3A-210ENST00000580713 MAN1C1Q9NR34 630 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 SPATA6Q9NWH7 488 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-210ENST00000580713 USP18Q9UMW8 372 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 CEP131Q9UPN4 1083 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 SNX14Q9Y5W7 946 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 CACNA1IQ9P0X4 2223 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 DENND4AQ7Z401 1863 aa12.12□□□□□ -0.47
TOP3A-210ENST00000580713 CLUHO75153 1309 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 MAP1BP46821 2468 aaKnown RBP12.11□□□□□ -0.47
TOP3A-210ENST00000580713 E7EWF7 191 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 C2CD2LO14523 706 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 SPTLC1O15269 473 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 LRRN2O75325 713 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 CYP21A2P08686 494 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 DARSP14868 501 aaKnown RBP12.11□□□□□ -0.47
TOP3A-210ENST00000580713 SLC11A1P49279 550 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 LMNB2Q03252 620 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 CSTF1Q05048 431 aaKnown RBP12.11□□□□□ -0.47
TOP3A-210ENST00000580713 RABEP1Q15276 862 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 NOMO2Q5JPE7 1267 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 PJA1Q8NG27 643 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 IGDCC4Q8TDY8 1250 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 NLRP7Q8WX94 980 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 SMG7Q92540 1137 aaKnown RBP12.11□□□□□ -0.47
TOP3A-210ENST00000580713 LPPQ93052 612 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 SHDQ96IW2 340 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 LARP6Q9BRS8 491 aaKnown RBP12.11□□□□□ -0.47
TOP3A-210ENST00000580713 PIDD1Q9HB75 910 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 MRPL17Q9NRX2 175 aaKnown RBP12.11□□□□□ -0.47
TOP3A-210ENST00000580713 EPS15L1Q9UBC2 864 aa12.11□□□□□ -0.47
TOP3A-210ENST00000580713 CCDC69A6NI79 296 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 MEIS1O00470 390 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 INPPL1O15357 1258 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 CSDE1O75534 798 aaKnown RBP12.1□□□□□ -0.47
TOP3A-210ENST00000580713 GLULP15104 373 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 RXRAP19793 462 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 AK2P54819 239 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 ANTXR2P58335 489 aa12.1□□□□□ -0.47
TOP3A-210ENST00000580713 TWF2Q6IBS0 349 aaKnown RBP12.1□□□□□ -0.47
TOP3A-210ENST00000580713 PLA2G4DQ86XP0 818 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms