RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 DOCK8Q8NF50 2099 aa16.09■□□□□ 0.17
CSNK1D-213ENST00000580446 NAV2Q8IVL1 2488 aa16.08■□□□□ 0.17
CSNK1D-213ENST00000580446 SHISA7A6NL88 538 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 AXIN1O15169 862 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 GLUD1P00367 558 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 CLCN3P51790 818 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 ACTR2P61160 394 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 SATB1Q01826 763 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 RNASELQ05823 741 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 KIAA1211LQ6NV74 962 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 FAM160A2Q8N612 972 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 SAMD3Q8N6K7 520 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 NT5C3AQ9H0P0 336 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 ARRDC1-AS1Q9H2J1 176 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 MRPL17Q9NRX2 175 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 SLC9A2Q9UBY0 812 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 DMXL2Q8TDJ6 3036 aa16.08■□□□□ 0.16
CSNK1D-213ENST00000580446 ZBTB42B2RXF5 422 aa16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 CYTH3O43739 400 aa16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 FSHRP23945 695 aa16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 NOVA1P51513 510 aaKnown RBP16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 ADCY1Q08828 1119 aa16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 ZNF252P-AS1Q0IIN9 211 aa16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 IQCA1Q86XH1 822 aa16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 C12orf50Q8NA57 414 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 B3GALT6Q96L58 329 aa16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 FAM126AQ9BYI3 521 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 WASF3Q9UPY6 502 aa16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 WDFY3Q8IZQ1 3526 aa16.07■□□□□ 0.16
CSNK1D-213ENST00000580446 A0A0U1RQF3 1178 aa16.06■□□□□ 0.16
CSNK1D-213ENST00000580446 DDX39AO00148 427 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-213ENST00000580446 C22orf31O95567 290 aa16.06■□□□□ 0.16
CSNK1D-213ENST00000580446 MAGEA9P43362 315 aa16.06■□□□□ 0.16
CSNK1D-213ENST00000580446 RPS9P46781 194 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-213ENST00000580446 AFF1P51825 1210 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-213ENST00000580446 NLRP11P59045 1033 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-213ENST00000580446 GRASPQ7Z6J2 395 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-213ENST00000580446 LOC400499M0QZD8 3231 aa16.06■□□□□ 0.16
CSNK1D-213ENST00000580446 MEIS2O14770 477 aa16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 ADH1AP07327 375 aa16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 LIMK1P53667 647 aa16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 TCEAL6Q6IPX3 200 aa16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 PLPPR4Q7Z2D5 763 aa16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 TCEAL3Q969E4 200 aa16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 BBC3Q96PG8 261 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 SCNM1Q9BWG6 230 aa16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 LSM14BQ9BX40 385 aaKnown RBP16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 CDH7Q9ULB5 785 aa16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 AKT3Q9Y243 479 aa16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 PRG3Q9Y2Y8 225 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 UBIAD1Q9Y5Z9 338 aa16.05■□□□□ 0.16
CSNK1D-213ENST00000580446 MYH15Q9Y2K3 1946 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 PALM3A6NDB9 673 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 F8W810 466 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 BACH1O14867 736 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 DDHD2O94830 711 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 URODP06132 367 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 NRLP54845 237 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 UBE2SQ16763 222 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 NOMO2Q5JPE7 1267 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 ZNF852Q6ZMS4 543 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 CEP68Q76N32 757 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 LRRC71Q8N4P6 559 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 ITFG1Q8TB96 612 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 RPS6KC1Q96S38 1066 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 PLA2G2FQ9BZM2 168 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 ADAMTS10Q9H324 1103 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 RNF41Q9H4P4 317 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 ZSWIM5Q9P217 1185 aa16.04■□□□□ 0.16
CSNK1D-213ENST00000580446 PNMA6FA0A0J9YX94 578 aa16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 TMEM8BA6NDV4 472 aa16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 NCAM2O15394 837 aa16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 RPL17P18621 184 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 ITGB3BPQ13352 177 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 IFIT1BQ5T764 474 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 CCDC60Q8IWA6 550 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 ING5Q8WYH8 240 aa16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 FGF13Q92913 245 aa16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 KIF12Q96FN5 646 aa16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 CDHR1Q96JP9 859 aa16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 PHF20Q9BVI0 1012 aa16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 PRKD2Q9BZL6 878 aa16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 CHRDQ9H2X0 955 aa16.03■□□□□ 0.16
CSNK1D-213ENST00000580446 TGM5O43548 720 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 HBP1O60381 514 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 CCNE2O96020 404 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 ATP4AP20648 1035 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 PFKPQ01813 784 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 NMIQ13287 307 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 GAS6Q14393 721 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 GLB1LQ6UWU2 654 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 PDZD3Q86UT5 571 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 ZNF687Q8N1G0 1237 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 TNPO1Q92973 898 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 CUL5Q93034 780 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 SCLT1Q96NL6 688 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 RIOX1Q9H6W3 641 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 SENP2Q9HC62 589 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 JADE2Q9NQC1 790 aa16.02■□□□□ 0.16
CSNK1D-213ENST00000580446 HELLSQ9NRZ9 838 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms