RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ZMYM2Q9UBW7 1377 aa13.89□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ZSWIM8A7E2V4 1837 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 LOC102724159A0A0B4J2E5 919 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 RBM47A0AV96 593 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ZBTB42B2RXF5 422 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 DKC1O60832 514 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 DGAT1O75907 488 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 HOXC6P09630 235 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 NR2F2P24468 414 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 RGS2P41220 211 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 EMC2Q15006 297 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PWP2Q15269 919 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 HAUS6Q7Z4H7 955 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ZSWIM2Q8NEG5 633 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 OR6J1Q8NGC5 347 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PLXNA1Q9UIW2 1896 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ERICH4A6NGS2 130 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 KIF5CO60282 957 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 LGALS2P05162 132 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 FKBP3Q00688 224 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 LRRC63Q05C16 580 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PPP2R3AQ06190 1150 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 FKBP15Q5T1M5 1219 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 RDH13Q8NBN7 331 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 OR8K1Q8NGG5 319 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ASAP3Q8TDY4 903 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 AFAP1L1Q8TED9 768 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 DRC1Q96MC2 740 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TSG101Q99816 390 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ATP6V0A4Q9HBG4 840 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 NRBP2Q9NSY0 501 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 RNF186Q9NXI6 227 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TSKSQ9UJT2 592 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 FHOD1Q9Y613 1164 aa13.88□□□□□ -0.19
CDK5RAP3-217ENST00000580287 A0A1W2PQC6 194 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 LGR5O75473 907 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 BEX3Q00994 111 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TARBP2Q15633 366 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ZNF569Q5MCW4 686 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TRPV1Q8NER1 839 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TRIB2Q92519 343 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PPP1R16BQ96T49 567 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 NIFKQ9BYG3 293 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PCIF1Q9H4Z3 704 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 DHX33Q9H6R0 707 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 AGPAT5Q9NUQ2 364 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PPP1R37O75864 691 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ELNP15502 786 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 FCGRTP55899 365 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 SYCP3Q8IZU3 236 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PPTC7Q8NI37 304 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 SLC7A3Q8WY07 619 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 APBA2Q99767 749 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 C16orf70Q9BSU1 422 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 STRA6Q9BX79 667 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 SEL1LQ9UBV2 794 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PCDHB13Q9Y5F0 798 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MRFAP1Q9Y605 127 aa13.87□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MKI67P46013 3256 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 AKAP3O75969 853 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ALDH1A1P00352 501 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CYP2J2P51589 502 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 SP3Q02447 781 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MKRN4PQ13434 485 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 BMT2Q1RMZ1 405 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MIIPQ5JXC2 388 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 IQSEC1Q6DN90 963 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TMEM161BQ8NDZ6 487 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ATP8B4Q8TF62 1192 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 SMARCAD1Q9H4L7 1026 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 KMT5AQ9NQR1 393 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 DENND3A2RUS2 1198 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 NR3C1P04150 777 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PNMA6AP0CW24 399 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 INSRRP14616 1297 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 GLRA2P23416 452 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 DMP1Q13316 513 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 PLPPR4Q7Z2D5 763 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 METTL13Q8N6R0 699 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CD99L2Q8TCZ2 262 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 FAM207AQ9NSI2 230 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ZNHIT6Q9NWK9 470 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CAPN11Q9UMQ6 739 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 GNEQ9Y223 722 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TRAF3IP3Q9Y228 551 aa13.86□□□□□ -0.19
CDK5RAP3-217ENST00000580287 SASH3O75995 380 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 FGFR1OPO95684 399 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MMP3P08254 477 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CNGA1P29973 690 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CCDC40Q4G0X9 1142 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 MCPH1Q8NEM0 835 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 SOCS4Q8WXH5 440 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 CBWD1Q9BRT8 395 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 AGPAT3Q9NRZ7 376 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 TYW1Q9NV66 732 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 ERAP1Q9NZ08 941 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 EPN1Q9Y6I3 576 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 EMSYQ7Z589 1322 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 LRRIQ4A6NIV6 560 aa13.85□□□□□ -0.19
CDK5RAP3-217ENST00000580287 H3BRB1 525 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms