RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 ARMC9Q7Z3E5 817 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 THEMISQ8N1K5 641 aaPredicted RBP7.23□□□□□ -1.25
COPS3-216ENST00000579716 TNIP2Q8NFZ5 429 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 SSH3Q8TE77 659 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 NSUN6Q8TEA1 469 aaKnown RBP7.23□□□□□ -1.25
COPS3-216ENST00000579716 CLIP3Q96DZ5 547 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 COG8Q96MW5 612 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 TOX2Q96NM4 488 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 ASB2Q96Q27 587 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 NAP1L3Q99457 506 aaPredicted RBP7.23□□□□□ -1.25
COPS3-216ENST00000579716 RHOXF2Q9BQY4 288 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 PUS7LQ9H0K6 701 aaKnown RBP7.23□□□□□ -1.25
COPS3-216ENST00000579716 CCDC68Q9H2F9 335 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 PRDM5Q9NQX1 630 aaPredicted RBP7.23□□□□□ -1.25
COPS3-216ENST00000579716 NSMCE4AQ9NXX6 385 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 CEP72Q9P209 647 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 GPR52Q9Y2T5 361 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 TMEM98Q9Y2Y6 226 aa7.23□□□□□ -1.25
COPS3-216ENST00000579716 M0R3H8 397 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 RFPL3O75679 317 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 DDHD2O94830 711 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 TGDSO95455 350 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 YEATS4O95619 227 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 CPP00450 1065 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 APOA4P06727 396 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 ZSCAN22P10073 491 aaPredicted RBP7.22□□□□□ -1.25
COPS3-216ENST00000579716 KRT9P35527 623 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 EPS15P42566 896 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 PSMC4P43686 418 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 CLCN7P51798 805 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 ATXN1P54253 815 aaKnown RBP7.22□□□□□ -1.25
COPS3-216ENST00000579716 POLR2FP61218 127 aaKnown RBP7.22□□□□□ -1.25
COPS3-216ENST00000579716 FAPQ12884 760 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 INPP5AQ14642 412 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 ODF2Q5BJF6 829 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 TTLL10Q6ZVT0 673 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 CYFIP1Q7L576 1253 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 ENOSF1Q7L5Y1 443 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 SLC41A1Q8IVJ1 513 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 COLGALT2Q8IYK4 626 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 TMEM57Q8N5G2 664 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 LRRC45Q96CN5 670 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 KIRREL1Q96J84 757 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 EPSTI1Q96J88 318 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 C8orf76Q96K31 380 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 RBM14Q96PK6 669 aaKnown RBP7.22□□□□□ -1.25
COPS3-216ENST00000579716 PI4K2AQ9BTU6 479 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 MYLK2Q9H1R3 596 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 TRPV4Q9HBA0 871 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 COPRSQ9NQ92 184 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 SEPT11Q9NVA2 429 aaKnown RBP7.22□□□□□ -1.25
COPS3-216ENST00000579716 MAPK8IP1Q9UQF2 711 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 CRYL1Q9Y2S2 319 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 ST14Q9Y5Y6 855 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 TACC3Q9Y6A5 838 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 RAD50Q92878 1312 aa7.22□□□□□ -1.25
COPS3-216ENST00000579716 A8MVJ9 347 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 KIF2AO00139 706 aaPredicted RBP7.21□□□□□ -1.26
COPS3-216ENST00000579716 FANCGO15287 622 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 P4HA2O15460 535 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 MAFO75444 373 aaPredicted RBP7.21□□□□□ -1.26
COPS3-216ENST00000579716 USP1O94782 785 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 POLR2BP30876 1174 aaKnown RBP7.21□□□□□ -1.26
COPS3-216ENST00000579716 GDNFP39905 211 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 CENPAP49450 140 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 MCM2P49736 904 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 CTAG1AP78358 180 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 NMIQ13287 307 aaPredicted RBP7.21□□□□□ -1.26
COPS3-216ENST00000579716 PABPC4Q13310 644 aaKnown RBP eCLIP7.21□□□□□ -1.264e-7■■■□□ 17.3
COPS3-216ENST00000579716 SP140Q13342 867 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 SLBPQ14493 270 aaKnown RBP eCLIP7.21□□□□□ -1.26
COPS3-216ENST00000579716 INAQ16352 499 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 ASIC2Q16515 512 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 WSCD2Q2TBF2 565 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 TUBB8Q3ZCM7 444 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 BOLA3Q53S33 107 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 GPATCH4Q5T3I0 446 aaKnown RBP7.21□□□□□ -1.26
COPS3-216ENST00000579716 OLFML1Q6UWY5 402 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 GALNTL5Q7Z4T8 443 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 CCDC91Q7Z6B0 441 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 ZER1Q7Z7L7 766 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 AMIGO3Q86WK7 504 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 LURAP1LQ8IV03 231 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 USP38Q8NB14 1042 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 ZNF540Q8NDQ6 660 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 ACMSDQ8TDX5 336 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 JAKMIP1Q96N16 626 aaKnown RBP7.21□□□□□ -1.26
COPS3-216ENST00000579716 DESI2Q9BSY9 194 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 GRPEL1Q9HAV7 217 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 AGO4Q9HCK5 861 aaKnown RBP7.21□□□□□ -1.26
COPS3-216ENST00000579716 ZNF624Q9P2J8 865 aaPredicted RBP7.21□□□□□ -1.26
COPS3-216ENST00000579716 PFDN2Q9UHV9 154 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 TRHDEQ9UKU6 1024 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 SUFUQ9UMX1 484 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 COG5Q9UP83 839 aa7.21□□□□□ -1.26
COPS3-216ENST00000579716 SUPT16HQ9Y5B9 1047 aaKnown RBP7.21□□□□□ -1.26
COPS3-216ENST00000579716 H7C0S8 307 aa7.2□□□□□ -1.26
COPS3-216ENST00000579716 FRS3O43559 492 aa7.2□□□□□ -1.26
COPS3-216ENST00000579716 TSPAN3O60637 253 aa7.2□□□□□ -1.26
COPS3-216ENST00000579716 PAHP00439 452 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms