RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 A0A1W2PQ64 194 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 A0A1W2PQD8 194 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 SFI1A8K8P3 1242 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 GRXCR1A8MXD5 290 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 H0YCG3 227 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 TLL1O43897 1013 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 TBCAO75347 108 aaKnown RBP12.73□□□□□ -0.37
ERBB2-208ENST00000578630 FAM13AO94988 1023 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 GJB5O95377 273 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 PLS3P13797 630 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 SARSP49591 514 aaKnown RBP12.73□□□□□ -0.37
ERBB2-208ENST00000578630 FAM189BP81408 668 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 DEFB103AP81534 67 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 RAD51AP2Q09MP3 1159 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 GIT2Q14161 759 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 TWF2Q6IBS0 349 aaKnown RBP12.73□□□□□ -0.37
ERBB2-208ENST00000578630 CEP57L1Q8IYX8 460 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 MYCT1Q8N699 235 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 DHX58Q96C10 678 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 CHAMP1Q96JM3 812 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 PRIMPOLQ96LW4 560 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 NTPCRQ9BSD7 190 aaKnown RBP12.73□□□□□ -0.37
ERBB2-208ENST00000578630 ZHX3Q9H4I2 956 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 PARVGQ9HBI0 331 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 GDPD2Q9HCC8 539 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 USP25Q9UHP3 1055 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 INSL6Q9Y581 213 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 PCDHA11Q9Y5I1 949 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 TRIOBPQ9H2D6 2365 aa12.73□□□□□ -0.37
ERBB2-208ENST00000578630 NPHP3-ACAD11A0A0J9YXS1 232 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 A0A1B0GVL5 298 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 EOMESO95936 686 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 SCP2P22307 547 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 ABCD1P33897 745 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 NPTX2P47972 431 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 MBTD1Q05BQ5 628 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 DSC3Q14574 896 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 TMEM132AQ24JP5 1023 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 NAALADL2Q58DX5 795 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 CDCA2Q69YH5 1023 aaPredicted RBP12.72□□□□□ -0.37
ERBB2-208ENST00000578630 GPR153Q6NV75 609 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 FAM117BQ6P1L5 589 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 NPAS4Q8IUM7 802 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 DAW1Q8N136 415 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 SLC17A8Q8NDX2 589 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 SPIRE2Q8WWL2 714 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 BSNDQ8WZ55 320 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 DDX12PQ92771 950 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 CCDC34Q96HJ3 373 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 TNMDQ9H2S6 317 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 FZD8Q9H461 694 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 TMEM134Q9H6X4 195 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 ELAC1Q9H777 363 aaKnown RBP12.72□□□□□ -0.37
ERBB2-208ENST00000578630 MINDY3Q9H8M7 445 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 MAGEF1Q9HAY2 307 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 AGPAT5Q9NUQ2 364 aa12.72□□□□□ -0.37
ERBB2-208ENST00000578630 PIN4Q9Y237 131 aaKnown RBP12.72□□□□□ -0.37
ERBB2-208ENST00000578630 A0A087X0B3 334 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 A0A0U1RQF3 1178 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 C9IYK1 514 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 ACKR2O00590 384 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 MGEA5O60502 916 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 LIG1P18858 919 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 IBSPP21815 317 aaPredicted RBP12.71□□□□□ -0.37
ERBB2-208ENST00000578630 SYKP43405 635 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 RAB27AP51159 221 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 RABGGTBP53611 331 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 STRN3Q13033 797 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 MAPK7Q13164 816 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 PRPF4BQ13523 1007 aaKnown RBP12.71□□□□□ -0.37
ERBB2-208ENST00000578630 FAM187BQ17R55 369 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 FAM109BQ6ICB4 259 aaPredicted RBP12.71□□□□□ -0.37
ERBB2-208ENST00000578630 NOTUMQ6P988 496 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 DYMQ7RTS9 669 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 CNNM3Q8NE01 707 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 LRRC15Q8TF66 581 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 TIFAQ96CG3 184 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 PGBD4Q96DM1 585 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 CCDC51Q96ER9 411 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 YME1L1Q96TA2 773 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 REEP2Q9BRK0 252 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 TRAIPQ9BWF2 469 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 PBX4Q9BYU1 374 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 SLC28A3Q9HAS3 691 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 KBTBD4Q9NVX7 518 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 TANC1Q9C0D5 1861 aa12.71□□□□□ -0.37
ERBB2-208ENST00000578630 MYMKA6NI61 221 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 SLC16A4O15374 487 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 HOXA2O43364 376 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 TRAK2O60296 914 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 TSPAN1O60635 241 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 ZNF623O75123 536 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 PRKCBP05771 671 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 SLFN14P0C7P3 912 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 IDEP14735 1019 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 PFKFB1P16118 471 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 GAP43P17677 238 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 DNAJB2P25686 324 aa12.7□□□□□ -0.38
ERBB2-208ENST00000578630 HOXA11P31270 313 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms