RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 PRR33A8MZF0 331 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 BTBD18B2RXH4 712 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 NEMFO60524 1076 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 LYPLA2O95372 231 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 GLP2RO95838 553 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 CTTNQ14247 550 aaKnown RBP16.67■□□□□ 0.26
MKS1-205ENST00000577315 MXD4Q14582 209 aaPredicted RBP16.67■□□□□ 0.26
MKS1-205ENST00000577315 EMC2Q15006 297 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 SAFBQ15424 915 aaKnown RBP eCLIP16.67■□□□□ 0.26
MKS1-205ENST00000577315 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 GLB1LQ6UWU2 654 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 TMEM184AQ6ZMB5 413 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 TMC7Q7Z402 723 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 KSR1Q8IVT5 923 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 TPH2Q8IWU9 490 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 SLC39A11Q8N1S5 342 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 TMEM169Q96HH4 297 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 TCF25Q9BQ70 676 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 TTC12Q9H892 705 aaPredicted RBP16.67■□□□□ 0.26
MKS1-205ENST00000577315 AGPAT5Q9NUQ2 364 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 RGL1Q9NZL6 768 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 WRAP73Q9P2S5 460 aaPredicted RBP16.67■□□□□ 0.26
MKS1-205ENST00000577315 LIMCH1Q9UPQ0 1083 aa16.67■□□□□ 0.26
MKS1-205ENST00000577315 FAM205CA6NFA0 338 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 PER2O15055 1255 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 SLITRK3O94933 977 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 AXLP30530 894 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 CYP4A11Q02928 519 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 POU5F1BQ06416 359 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 SMC1AQ14683 1233 aaKnown RBP16.66■□□□□ 0.26
MKS1-205ENST00000577315 FERMT3Q86UX7 667 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 CNNM3Q8NE01 707 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 PRPF31Q8WWY3 499 aaKnown RBP16.66■□□□□ 0.26
MKS1-205ENST00000577315 TMEM143Q96AN5 459 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 CCDC43Q96MW1 224 aaKnown RBP16.66■□□□□ 0.26
MKS1-205ENST00000577315 EIF2AK1Q9BQI3 630 aaKnown RBP16.66■□□□□ 0.26
MKS1-205ENST00000577315 LLPHQ9BRT6 129 aaKnown RBP16.66■□□□□ 0.26
MKS1-205ENST00000577315 ANKEF1Q9NU02 776 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 STK39Q9UEW8 545 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 BARX2Q9UMQ3 279 aaPredicted RBP16.66■□□□□ 0.26
MKS1-205ENST00000577315 PCDHGC5Q9Y5F6 944 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 CNTNAP2Q9UHC6 1331 aa16.66■□□□□ 0.26
MKS1-205ENST00000577315 JAK2O60674 1132 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 DTNBO60941 627 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 DGAT1O75907 488 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 SRGAP2CP0DJJ0 459 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 XRCC6P12956 609 aaKnown RBP eCLIP16.65■□□□□ 0.26
MKS1-205ENST00000577315 HOXB8P17481 243 aaPredicted RBP16.65■□□□□ 0.26
MKS1-205ENST00000577315 BCAR1P56945 870 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 NCBP1Q09161 790 aaKnown RBP16.65■□□□□ 0.26
MKS1-205ENST00000577315 LAMTOR4Q0VGL1 99 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 ORC2Q13416 577 aaPredicted RBP16.65■□□□□ 0.26
MKS1-205ENST00000577315 GIT2Q14161 759 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 TFDP1Q14186 410 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 ZNF579Q8NAF0 562 aaKnown RBP16.65■□□□□ 0.26
MKS1-205ENST00000577315 RNF149Q8NC42 400 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 ZSCAN31Q96LW9 406 aaPredicted RBP16.65■□□□□ 0.26
MKS1-205ENST00000577315 HSD17B14Q9BPX1 270 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 C11orf16Q9NQ32 467 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 KANSL3Q9P2N6 904 aa16.65■□□□□ 0.26
MKS1-205ENST00000577315 ERLIN2O94905 339 aa16.64■□□□□ 0.25
MKS1-205ENST00000577315 TXKP42681 527 aa16.64■□□□□ 0.25
MKS1-205ENST00000577315 RNASELQ05823 741 aaKnown RBP16.64■□□□□ 0.25
MKS1-205ENST00000577315 KCNC3Q14003 757 aa16.64■□□□□ 0.25
MKS1-205ENST00000577315 NOMO2Q5JPE7 1267 aa16.64■□□□□ 0.25
MKS1-205ENST00000577315 MRPL10Q7Z7H8 261 aaKnown RBP16.64■□□□□ 0.25
MKS1-205ENST00000577315 URGCPQ8TCY9 931 aa16.64■□□□□ 0.25
MKS1-205ENST00000577315 CASP10Q92851 521 aa16.64■□□□□ 0.25
MKS1-205ENST00000577315 MTMR9Q96QG7 549 aa16.64■□□□□ 0.25
MKS1-205ENST00000577315 PHF7Q9BWX1 381 aaPredicted RBP16.64■□□□□ 0.25
MKS1-205ENST00000577315 UBN1Q9NPG3 1134 aa16.64■□□□□ 0.25
MKS1-205ENST00000577315 TBC1D13Q9NVG8 400 aa16.64■□□□□ 0.25
MKS1-205ENST00000577315 USP15Q9Y4E8 981 aaPredicted RBP16.64■□□□□ 0.25
MKS1-205ENST00000577315 PCDHB2Q9Y5E7 798 aa16.64■□□□□ 0.25
MKS1-205ENST00000577315 ZC3H11AO75152 810 aaKnown RBP eCLIP16.63■□□□□ 0.25
MKS1-205ENST00000577315 OFD1O75665 1012 aa16.63■□□□□ 0.25
MKS1-205ENST00000577315 PBX3P40426 434 aa16.63■□□□□ 0.25
MKS1-205ENST00000577315 PTENP60484 403 aa16.63■□□□□ 0.25
MKS1-205ENST00000577315 HMGN5P82970 282 aaKnown RBP16.63■□□□□ 0.25
MKS1-205ENST00000577315 ANKRD54Q6NXT1 300 aa16.63■□□□□ 0.25
MKS1-205ENST00000577315 IFNLR1Q8IU57 520 aaPredicted RBP16.63■□□□□ 0.25
MKS1-205ENST00000577315 MRPL43Q8N983 215 aaKnown RBP16.63■□□□□ 0.25
MKS1-205ENST00000577315 LPPQ93052 612 aa16.63■□□□□ 0.25
MKS1-205ENST00000577315 CCDC51Q96ER9 411 aa16.63■□□□□ 0.25
MKS1-205ENST00000577315 C8orf76Q96K31 380 aa16.63■□□□□ 0.25
MKS1-205ENST00000577315 FAM193BQ96PV7 902 aaPredicted RBP16.63■□□□□ 0.25
MKS1-205ENST00000577315 NRDE2Q9H7Z3 1164 aa16.63■□□□□ 0.25
MKS1-205ENST00000577315 RSAD1Q9HA92 442 aa16.63■□□□□ 0.25
MKS1-205ENST00000577315 SH2B1Q9NRF2 756 aaPredicted RBP16.63■□□□□ 0.25
MKS1-205ENST00000577315 MYO10Q9HD67 2058 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 FAM86C2PA6NEL3 165 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 HIDE1A8MVS5 230 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 SEC24BO95487 1268 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
MKS1-205ENST00000577315 TECP42680 631 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 RARRES1P49788 294 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 FOSBP53539 338 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 CBX2Q14781 532 aaPredicted RBP16.62■□□□□ 0.25
MKS1-205ENST00000577315 TPRNQ4KMQ1 711 aa16.62■□□□□ 0.25
MKS1-205ENST00000577315 HERC4Q5GLZ8 1057 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms