RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 INPP5FQ9Y2H2 1132 aa13.1□□□□□ -0.31
CTDNEP1-212ENST00000576613 NID2Q14112 1375 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 A0A087WZ62 844 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 ADAMTS3O15072 1205 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 GALTP07902 379 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 AOC1P19801 751 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 PTPRZ1P23471 2315 aaPredicted RBP13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 DRP2Q13474 957 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 PTPN14Q15678 1187 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 LONRF3Q496Y0 759 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 RIF1Q5UIP0 2472 aaKnown RBP13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 CWF19L1Q69YN2 538 aaKnown RBP13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 ELMSAN1Q6PJG2 1045 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 C15orf39Q6ZRI6 1047 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 CATSPER4Q7RTX7 472 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 ERMP1Q7Z2K6 904 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 MIER3Q7Z3K6 550 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 RHPN2Q8IUC4 686 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 RASEFQ8IZ41 740 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 RTP3Q9BQQ7 232 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 FDXACB1Q9BRP7 624 aaPredicted RBP13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 NIFKQ9BYG3 293 aaKnown RBP13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 GBP3Q9H0R5 595 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 UNC45AQ9H3U1 944 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 FBXL21Q9UKT6 434 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 DUSP12Q9UNI6 340 aa13.09□□□□□ -0.31
CTDNEP1-212ENST00000576613 FAM186AA6NE01 2351 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 IGKV6-21A0A0C4DH24 114 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 ZNF623O75123 536 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 OFD1O75665 1012 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 KLRC2P26717 231 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 SLC11A1P49279 550 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 BMP2KLQ5H9B9 411 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 BCL7CQ8WUZ0 217 aaPredicted RBP13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 PHKBQ93100 1093 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 NLRP4Q96MN2 994 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 FAM193BQ96PV7 902 aaPredicted RBP13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 JPH2Q9BR39 696 aaPredicted RBP13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 RNF26Q9BY78 433 aaPredicted RBP13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 C22orf23Q9BZE7 217 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 IGSF9Q9P2J2 1179 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 SUCLA2Q9P2R7 463 aaPredicted RBP13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 DNAJB4Q9UDY4 337 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 DPP7Q9UHL4 492 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 C2orf16Q68DN1 1984 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 WDR87Q6ZQQ6 2873 aa13.08□□□□□ -0.32
CTDNEP1-212ENST00000576613 MAFO75444 373 aaPredicted RBP13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 PSMD10O75832 226 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 CLCN4P51793 760 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 NONOQ15233 471 aaKnown RBP eCLIP13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 LETM2Q2VYF4 491 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 Q6ZUG5 572 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 CCDC105Q8IYK2 499 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 ADSSL1Q8N142 457 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 SIX5Q8N196 739 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 BRF1Q92994 677 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 KLHL5Q96PQ7 755 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 KCNK12Q9HB15 430 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 MRPL17Q9NRX2 175 aaKnown RBP13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 AGPAT5Q9NUQ2 364 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 KANSL3Q9P2N6 904 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
CTDNEP1-212ENST00000576613 MEIS3P2A8K0S8 358 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 DDX11L8A8MPP1 907 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 ALDH2P05091 517 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 SSBP05455 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 URODP06132 367 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 CNPP09543 421 aaKnown RBP13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 RFX1P22670 979 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 ID4P47928 161 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 NLRP5P59047 1200 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 ANGPT1Q15389 498 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 Q4G0T1 1027 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 ZNF280BQ86YH2 543 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 DTWD2Q8NBA8 298 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 TBCKQ8TEA7 893 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 SLC7A3Q8WY07 619 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 STAMQ92783 540 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 CEP89Q96ST8 783 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 TMEM175Q9BSA9 504 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 VN1R3Q9BXE9 311 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 SLC26A6Q9BXS9 759 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 RSAD1Q9HA92 442 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 VPS54Q9P1Q0 977 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 SSX2IPQ9Y2D8 614 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 FAN1Q9Y2M0 1017 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 CNTNAP2Q9UHC6 1331 aa13.06□□□□□ -0.32
CTDNEP1-212ENST00000576613 ZNF292O60281 2723 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 TMEM150BA6NC51 233 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 ADH1AP07327 375 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 CPA1P15085 419 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 IFNAR1P17181 557 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 NPR3P17342 541 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 PSMC5P62195 406 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 BLOC1S2Q6QNY1 142 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 CYP26C1Q6V0L0 522 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 KSR1Q8IVT5 923 aa13.05□□□□□ -0.32
CTDNEP1-212ENST00000576613 EXOC8Q8IYI6 725 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms