RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 DLG4P78352 724 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ZYXQ15942 572 aaKnown RBP9.69□□□□□ -0.86
NCBP3-204ENST00000574911 INTS8Q75QN2 995 aaKnown RBP9.69□□□□□ -0.86
NCBP3-204ENST00000574911 NIPA1Q7RTP0 329 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 MIER3Q7Z3K6 550 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 PALB2Q86YC2 1186 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 RDH13Q8NBN7 331 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ACCSQ96QU6 501 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 CARD9Q9H257 536 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 RABEP2Q9H5N1 569 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 FAM114A2Q9NRY5 505 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 COL20A1Q9P218 1284 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 DBR1Q9UK59 544 aaKnown RBP9.69□□□□□ -0.86
NCBP3-204ENST00000574911 COG5Q9UP83 839 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 EMSYQ7Z589 1322 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 LOXHD1Q8IVV2 1947 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 DDX39AO00148 427 aaKnown RBP9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ICAM1P05362 532 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 VAMP7P51809 220 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 MCCD1P59942 119 aaPredicted RBP9.69□□□□□ -0.86
NCBP3-204ENST00000574911 PTENP60484 403 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 PPP3CAQ08209 521 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ZNF844Q08AG5 666 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 MTMR3Q13615 1198 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 DLGAP5Q15398 846 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 EPC2Q52LR7 807 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 C1orf220Q5T0J3 134 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ARHGEF19Q8IW93 802 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ATP8B4Q8TF62 1192 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 AGBL1Q96MI9 1066 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 CELF4Q9BZC1 486 aaKnown RBP9.69□□□□□ -0.86
NCBP3-204ENST00000574911 GLIS2Q9BZE0 524 aaPredicted RBP9.69□□□□□ -0.86
NCBP3-204ENST00000574911 EPN3Q9H201 632 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 PCIF1Q9H4Z3 704 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 USP20Q9Y2K6 914 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 NR2E1Q9Y466 385 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 FAM169AQ9Y6X4 670 aa9.69□□□□□ -0.86
NCBP3-204ENST00000574911 ZNF536O15090 1300 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 A0A087WUV0 522 aaPredicted RBP9.68□□□□□ -0.86
NCBP3-204ENST00000574911 SRRM3A6NNA2 597 aaPredicted RBP9.68□□□□□ -0.86
NCBP3-204ENST00000574911 LRRN2O75325 713 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 LYPLA2O95372 231 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 CPP00450 1065 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 MYZAPP0CAP1 466 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 PLS3P13797 630 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 MDH1P40925 334 aaKnown RBP9.68□□□□□ -0.86
NCBP3-204ENST00000574911 GUCY1A3Q02108 690 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 GHRHRQ02643 423 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 PPP2R5EQ16537 467 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 GRIPAP1Q4V328 841 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 FKBP1CQ5VVH2 108 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 TMC3Q7Z5M5 1100 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 CDAN1Q8IWY9 1227 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 RHOT2Q8IXI1 618 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 SLC20A1Q8WUM9 679 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 CLEC4DQ8WXI8 215 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 PPM1EQ8WY54 764 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 AGO4Q9HCK5 861 aaKnown RBP9.68□□□□□ -0.86
NCBP3-204ENST00000574911 UBE2TQ9NPD8 197 aaPredicted RBP9.68□□□□□ -0.86
NCBP3-204ENST00000574911 KCNH7Q9NS40 1196 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 LARSQ9P2J5 1176 aaKnown RBP9.68□□□□□ -0.86
NCBP3-204ENST00000574911 UTP11Q9Y3A2 253 aaKnown RBP9.68□□□□□ -0.86
NCBP3-204ENST00000574911 UBIAD1Q9Y5Z9 338 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 ZHX2Q9Y6X8 837 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 GOLGA6L10A6NI86 522 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 TISP43B9A030 160 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 MYO1FO00160 1098 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 MAPK13O15264 365 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 PMM2O15305 246 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 INPP5BP32019 993 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 CTNNA1P35221 906 aaKnown RBP9.68□□□□□ -0.86
NCBP3-204ENST00000574911 RARRES1P49788 294 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 CLUL1Q15846 466 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 PTGISQ16647 500 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 AGBL2Q5U5Z8 902 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 C11orf63Q6NUN7 778 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 MAEAQ7L5Y9 396 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 OR2W6PQ8NHA6 318 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 IL31RAQ8NI17 732 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 PLEKHO2Q8TD55 490 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 NAP1L3Q99457 506 aaPredicted RBP9.68□□□□□ -0.86
NCBP3-204ENST00000574911 PAGR1Q9BTK6 254 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 TXLNGYQ9BZA5 131 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 ST6GALNAC4Q9H4F1 302 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 PGAP2Q9UHJ9 254 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 CCPG1Q9ULG6 757 aa9.68□□□□□ -0.86
NCBP3-204ENST00000574911 NDUFAB1O14561 156 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 C21orf2O43822 256 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 GTF2BQ00403 316 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 MAP3K10Q02779 954 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 CETN1Q12798 172 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 BIRC3Q13489 604 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 TNIP1Q15025 636 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 TKFCQ3LXA3 575 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 SPDYCQ5MJ68 293 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 SAMD1Q6SPF0 538 aaPredicted RBP9.67□□□□□ -0.86
NCBP3-204ENST00000574911 ARFGAP2Q8N6H7 521 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 CBWD1Q9BRT8 395 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 TRIM51Q9BSJ1 452 aa9.67□□□□□ -0.86
NCBP3-204ENST00000574911 TMEM39BQ9GZU3 492 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms