RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TULP1O00294 542 aaPredicted RBP15.28■□□□□ 0.04
VPS33B-208ENST00000574755 DGAT1O75907 488 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 TUBBP07437 444 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 ABHD15Q6UXT9 468 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 ZSWIM2Q8NEG5 633 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 HNRNPLLQ8WVV9 542 aaKnown RBP15.28■□□□□ 0.04
VPS33B-208ENST00000574755 TLR10Q9BXR5 811 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 C17orf75Q9HAS0 396 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 BTBD7Q9P203 1132 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 TSKSQ9UJT2 592 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 PFASO15067 1338 aa15.28■□□□□ 0.04
VPS33B-208ENST00000574755 N4BP1O75113 896 aaKnown RBP15.27■□□□□ 0.04
VPS33B-208ENST00000574755 EIF3JO75822 258 aaKnown RBP15.27■□□□□ 0.04
VPS33B-208ENST00000574755 STBD1O95210 358 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 IREB2P48200 963 aaKnown RBP15.27■□□□□ 0.04
VPS33B-208ENST00000574755 SP2Q02086 613 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 CCDC181Q5TID7 509 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 CYFIP1Q7L576 1253 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 MAP4K3Q8IVH8 894 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 MCPH1Q8NEM0 835 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 BSNDQ8WZ55 320 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 HVCN1Q96D96 273 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 OTUD5Q96G74 571 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 ELP3Q9H9T3 547 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 CYP26B1Q9NR63 512 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 FBXO40Q9UH90 709 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 PCDHGC5Q9Y5F6 944 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 A0A0G2JMZ2 1700 aa15.27■□□□□ 0.04
VPS33B-208ENST00000574755 GOLGA8IPA6NC78 632 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 GOLGA8JA6NMD2 632 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 IRF6O14896 467 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 CNGA1P29973 690 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 GCLMP48507 274 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 PPP3CAQ08209 521 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 C2orf54Q08AI8 447 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 FSTL1Q12841 308 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 ARHGAP44Q17R89 818 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 PHLDB3Q6NSJ2 640 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 SEPT14Q6ZU15 432 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 FMNL3Q8IVF7 1028 aa15.27■□□□□ 0.03
VPS33B-208ENST00000574755 BTNL10A8MVZ5 291 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 ANKRD63C9JTQ0 380 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 MAPK13O15264 365 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 SASH3O75995 380 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 FTCDO95954 541 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 SUPT20HL2P0C7V6 817 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 RFX1P22670 979 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 ALDH5A1P51649 535 aaPredicted RBP15.26■□□□□ 0.03
VPS33B-208ENST00000574755 IRX3P78415 501 aaPredicted RBP15.26■□□□□ 0.03
VPS33B-208ENST00000574755 SNRNP35Q16560 246 aaKnown RBP15.26■□□□□ 0.03
VPS33B-208ENST00000574755 NCAPG2Q86XI2 1143 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 DNAAF5Q86Y56 855 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 RIOX2Q8IUF8 465 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 LMO3Q8TAP4 145 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 SPIRE2Q8WWL2 714 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 NTPCRQ9BSD7 190 aaKnown RBP15.26■□□□□ 0.03
VPS33B-208ENST00000574755 GPR88Q9GZN0 384 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 ATP6V0A4Q9HBG4 840 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 DAAM1Q9Y4D1 1078 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 DDX3XO00571 662 aaKnown RBP eCLIP15.26■□□□□ 0.039e-12■■□□□ 11.6
VPS33B-208ENST00000574755 P4HA2O15460 535 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 CCDC172P0C7W6 258 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 ADSSP30520 456 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 MTERF2Q49AM1 385 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 WDR93Q6P2C0 686 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 SAAL1Q96ER3 474 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 FUT8Q9BYC5 575 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 SPATC1LQ9H0A9 340 aa15.26■□□□□ 0.03
VPS33B-208ENST00000574755 IGSF9BQ9UPX0 1349 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 LRRN2O75325 713 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 ICAM3P32942 547 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 PAFAH1B1P43034 410 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 NOP2P46087 812 aaKnown RBP15.25■□□□□ 0.03
VPS33B-208ENST00000574755 DNA2P51530 1060 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 XKR3Q5GH77 459 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 BEND6Q5SZJ8 279 aaPredicted RBP15.25■□□□□ 0.03
VPS33B-208ENST00000574755 C1orf220Q5T0J3 134 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 CBWD2Q8IUF1 395 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 PROCA1Q8NCQ7 364 aaPredicted RBP15.25■□□□□ 0.03
VPS33B-208ENST00000574755 PLEKHO2Q8TD55 490 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 U2AF1L4Q8WU68 220 aaKnown RBP15.25■□□□□ 0.03
VPS33B-208ENST00000574755 PAGR1Q9BTK6 254 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 ABCB6Q9NP58 842 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 XPNPEP1Q9NQW7 623 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 GRID2IPA4D2P6 1211 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 ADRB2P07550 413 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 H2AFZP0C0S5 128 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 PLA2G4AP47712 749 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 MXI1P50539 228 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 PPATQ06203 517 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 IFI16Q16666 785 aaKnown RBP15.25■□□□□ 0.03
VPS33B-208ENST00000574755 H2AFVQ71UI9 128 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 GLYCTKQ8IVS8 523 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 ZNF526Q8TF50 670 aaPredicted RBP15.25■□□□□ 0.03
VPS33B-208ENST00000574755 CLMNQ96JQ2 1002 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 IFT74Q96LB3 600 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 UBE2TQ9NPD8 197 aaPredicted RBP15.25■□□□□ 0.03
VPS33B-208ENST00000574755 ZNF302Q9NR11 478 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 PDLIM7Q9NR12 457 aa15.25■□□□□ 0.03
VPS33B-208ENST00000574755 NENFQ9UMX5 172 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms