RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 EMILIN2Q9BXX0 1053 aa19.75■□□□□ 0.75
CCDC40-211ENST00000574099 ZMYND12Q9H0C1 365 aa19.75■□□□□ 0.75
CCDC40-211ENST00000574099 C6orf50Q9HD87 102 aa19.75■□□□□ 0.75
CCDC40-211ENST00000574099 CHST12Q9NRB3 414 aa19.75■□□□□ 0.75
CCDC40-211ENST00000574099 FAM105AQ9NUU6 356 aa19.75■□□□□ 0.75
CCDC40-211ENST00000574099 DMXL1Q9Y485 3027 aa19.74■□□□□ 0.75
CCDC40-211ENST00000574099 ESYT2A0FGR8 921 aa19.74■□□□□ 0.75
CCDC40-211ENST00000574099 GAS7O60861 476 aa19.74■□□□□ 0.75
CCDC40-211ENST00000574099 CNPP09543 421 aaKnown RBP19.74■□□□□ 0.75
CCDC40-211ENST00000574099 MYBP10242 640 aa19.74■□□□□ 0.75
CCDC40-211ENST00000574099 ADD1P35611 737 aaKnown RBP19.74■□□□□ 0.75
CCDC40-211ENST00000574099 ZNF280BQ86YH2 543 aa19.74■□□□□ 0.75
CCDC40-211ENST00000574099 RSAD2Q8WXG1 361 aa19.74■□□□□ 0.75
CCDC40-211ENST00000574099 RIN2Q8WYP3 895 aaPredicted RBP19.74■□□□□ 0.75
CCDC40-211ENST00000574099 YTHDC1Q96MU7 727 aaKnown RBP19.74■□□□□ 0.75
CCDC40-211ENST00000574099 UNC45AQ9H3U1 944 aa19.74■□□□□ 0.75
CCDC40-211ENST00000574099 R4GN57 208 aa19.74■□□□□ 0.75
CCDC40-211ENST00000574099 C2CD2LO14523 706 aa19.73■□□□□ 0.75
CCDC40-211ENST00000574099 MSH4O15457 936 aa19.73■□□□□ 0.75
CCDC40-211ENST00000574099 N4BP1O75113 896 aaKnown RBP19.73■□□□□ 0.75
CCDC40-211ENST00000574099 OFD1O75665 1012 aa19.73■□□□□ 0.75
CCDC40-211ENST00000574099 GBP2P32456 591 aaPredicted RBP19.73■□□□□ 0.75
CCDC40-211ENST00000574099 CIITAP33076 1130 aa19.73■□□□□ 0.75
CCDC40-211ENST00000574099 EXOSC10Q01780 885 aaKnown RBP19.73■□□□□ 0.75
CCDC40-211ENST00000574099 TARBP2Q15633 366 aaKnown RBP19.73■□□□□ 0.75
CCDC40-211ENST00000574099 DHX32Q7L7V1 743 aaKnown RBP19.73■□□□□ 0.75
CCDC40-211ENST00000574099 RHPN2Q8IUC4 686 aa19.73■□□□□ 0.75
CCDC40-211ENST00000574099 RMDN1Q96DB5 314 aa19.73■□□□□ 0.75
CCDC40-211ENST00000574099 MAN1C1Q9NR34 630 aa19.73■□□□□ 0.75
CCDC40-211ENST00000574099 CA14Q9ULX7 337 aa19.73■□□□□ 0.75
CCDC40-211ENST00000574099 KRBA1A5PL33 1030 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 CARNS1A5YM72 827 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 SKIP12755 728 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 ADCK5Q3MIX3 580 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 RNF20Q5VTR2 975 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 LRCH2Q5VUJ6 765 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 CATSPER4Q7RTX7 472 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 KSR1Q8IVT5 923 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 KIAA2013Q8IYS2 634 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 URGCPQ8TCY9 931 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 CCDC12Q8WUD4 166 aaPredicted RBP19.72■□□□□ 0.75
CCDC40-211ENST00000574099 RSPH1Q8WYR4 309 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 NLRP4Q96MN2 994 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 TRAIPQ9BWF2 469 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 TEKT3Q9BXF9 490 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 IGSF9Q9P2J2 1179 aa19.72■□□□□ 0.75
CCDC40-211ENST00000574099 MED19A0JLT2 244 aaPredicted RBP19.71■□□□□ 0.75
CCDC40-211ENST00000574099 DDHD2O94830 711 aa19.71■□□□□ 0.75
CCDC40-211ENST00000574099 LMNAP02545 664 aaKnown RBP19.71■□□□□ 0.75
CCDC40-211ENST00000574099 SFNP31947 248 aa19.71■□□□□ 0.75
CCDC40-211ENST00000574099 AFF1P51825 1210 aaKnown RBP19.71■□□□□ 0.75
CCDC40-211ENST00000574099 JAK3P52333 1124 aa19.71■□□□□ 0.75
CCDC40-211ENST00000574099 SPECC1Q5M775 1068 aa19.71■□□□□ 0.75
CCDC40-211ENST00000574099 C15orf39Q6ZRI6 1047 aa19.71■□□□□ 0.75
CCDC40-211ENST00000574099 CCDC136Q96JN2 1154 aa19.71■□□□□ 0.75
CCDC40-211ENST00000574099 HINFPQ9BQA5 517 aa19.71■□□□□ 0.75
CCDC40-211ENST00000574099 MRPL17Q9NRX2 175 aaKnown RBP19.71■□□□□ 0.75
CCDC40-211ENST00000574099 SUCLA2Q9P2R7 463 aaPredicted RBP19.71■□□□□ 0.75
CCDC40-211ENST00000574099 GNA11P29992 359 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 DNM2P50570 870 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 RAB27AP51159 221 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 AK2P54819 239 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 AGMOQ6ZNB7 445 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 MIER3Q7Z3K6 550 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 ZNF410Q86VK4 478 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 SLC5A5Q92911 643 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 FAM193BQ96PV7 902 aaPredicted RBP19.7■□□□□ 0.74
CCDC40-211ENST00000574099 TBC1D17Q9HA65 648 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 PCDHB2Q9Y5E7 798 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 WDR87Q6ZQQ6 2873 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 CACNA1AO00555 2505 aa19.7■□□□□ 0.74
CCDC40-211ENST00000574099 CCDC195A0A1B0GUA6 201 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 INPPL1O15357 1258 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 EDIL3O43854 480 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 LILRB3O75022 631 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 POMCP01189 267 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 URODP06132 367 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 FGD1P98174 961 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 DGLUCYQ7Z3D6 616 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 RASEFQ8IZ41 740 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 PHKBQ93100 1093 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 PGBD4Q96DM1 585 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 CEP89Q96ST8 783 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 RIT2Q99578 217 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 NIFKQ9BYG3 293 aaKnown RBP19.69■□□□□ 0.74
CCDC40-211ENST00000574099 INO80BQ9C086 356 aaPredicted RBP19.69■□□□□ 0.74
CCDC40-211ENST00000574099 RSAD1Q9HA92 442 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 WNT16Q9UBV4 365 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 FAN1Q9Y2M0 1017 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 PRG3Q9Y2Y8 225 aaPredicted RBP19.69■□□□□ 0.74
CCDC40-211ENST00000574099 ZNF292O60281 2723 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 CLUHO75153 1309 aa19.69■□□□□ 0.74
CCDC40-211ENST00000574099 IGKV6-21A0A0C4DH24 114 aa19.68■□□□□ 0.74
CCDC40-211ENST00000574099 NRP1O14786 923 aa19.68■□□□□ 0.74
CCDC40-211ENST00000574099 ZNF623O75123 536 aa19.68■□□□□ 0.74
CCDC40-211ENST00000574099 RFPL2O75678 378 aa19.68■□□□□ 0.74
CCDC40-211ENST00000574099 DCNP07585 359 aaKnown RBP19.68■□□□□ 0.74
CCDC40-211ENST00000574099 CPA1P15085 419 aa19.68■□□□□ 0.74
CCDC40-211ENST00000574099 CDC42EP1Q00587 391 aa19.68■□□□□ 0.74
CCDC40-211ENST00000574099 XKR3Q5GH77 459 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms