RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 MFSD10Q14728 455 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 TCP11X2Q5H9J9 407 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 FAM47CQ5HY64 1035 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 CENPPQ6IPU0 288 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 ARMCX5Q6P1M9 558 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 CNKSR3Q6P9H4 555 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.56□□□□□ -0.72
NDE1-208ENST00000573694 MYOCDQ8IZQ8 938 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 C17orf53Q8N3J3 647 aaPredicted RBP10.56□□□□□ -0.72
NDE1-208ENST00000573694 CSGALNACT2Q8N6G5 542 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 SCFD1Q8WVM8 642 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 ATXN2LQ8WWM7 1075 aaKnown RBP10.56□□□□□ -0.72
NDE1-208ENST00000573694 CNOT6LQ96LI5 555 aaKnown RBP10.56□□□□□ -0.72
NDE1-208ENST00000573694 SPATA33Q96N06 139 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 SH2D3AQ9BRG2 576 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 PBX4Q9BYU1 374 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 THAP9Q9H5L6 903 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 ZSWIM4Q9H7M6 989 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 JPH1Q9HDC5 661 aaPredicted RBP10.56□□□□□ -0.72
NDE1-208ENST00000573694 TRMT13Q9NUP7 481 aaKnown RBP10.56□□□□□ -0.72
NDE1-208ENST00000573694 SLC9A2Q9UBY0 812 aa10.56□□□□□ -0.72
NDE1-208ENST00000573694 ZMYM2Q9UBW7 1377 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 SFI1A8K8P3 1242 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 H3BRB1 525 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 NOP56O00567 594 aaKnown RBP10.55□□□□□ -0.72
NDE1-208ENST00000573694 ZNF862O60290 1169 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 USO1O60763 962 aaKnown RBP10.55□□□□□ -0.72
NDE1-208ENST00000573694 LYPLA2O95372 231 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 TPM3P06753 285 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 PBX1P40424 430 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 RARRES1P49788 294 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 SLC26A2P50443 739 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 CCL23P55773 120 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 ACTR2P61160 394 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 PSMC5P62195 406 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 SPAG1Q07617 926 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 NR1I3Q14994 352 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 KIAA0753Q2KHM9 967 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 ZCWPW2Q504Y3 356 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 UTP14CQ5TAP6 766 aaKnown RBP10.55□□□□□ -0.72
NDE1-208ENST00000573694 LRRC55Q6ZSA7 311 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 EPM2AIP1Q7L775 607 aaPredicted RBP10.55□□□□□ -0.72
NDE1-208ENST00000573694 SERINC5Q86VE9 423 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 CREBRFQ8IUR6 639 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 CCDC60Q8IWA6 550 aaPredicted RBP10.55□□□□□ -0.72
NDE1-208ENST00000573694 DAW1Q8N136 415 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 KCTD17Q8N5Z5 321 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 RDM1Q8NG50 284 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 VPS16Q9H269 839 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 TUT1Q9H6E5 874 aaKnown RBP10.55□□□□□ -0.72
NDE1-208ENST00000573694 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
NDE1-208ENST00000573694 IMPACTQ9P2X3 320 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 GABBR1Q9UBS5 961 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 DBR1Q9UK59 544 aaKnown RBP10.55□□□□□ -0.72
NDE1-208ENST00000573694 SQORQ9Y6N5 450 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 NRCAMQ92823 1304 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 IGSF9BQ9UPX0 1349 aa10.55□□□□□ -0.72
NDE1-208ENST00000573694 UNC80Q8N2C7 3258 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 PRPF6O94906 941 aaKnown RBP10.54□□□□□ -0.72
NDE1-208ENST00000573694 STBD1O95210 358 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 GGPS1O95749 300 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 GAP43P17677 238 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 GUCY2CP25092 1073 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 MSNP26038 577 aaKnown RBP10.54□□□□□ -0.72
NDE1-208ENST00000573694 NMT1P30419 496 aaKnown RBP10.54□□□□□ -0.72
NDE1-208ENST00000573694 YWHABP31946 246 aaKnown RBP10.54□□□□□ -0.72
NDE1-208ENST00000573694 HOXD13P35453 343 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 KCNJ6P48051 423 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 ZNF131P52739 623 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 NPEPPSP55786 919 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 CCZ1BP86790 482 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 CCZ1P86791 482 aaPredicted RBP10.54□□□□□ -0.72
NDE1-208ENST00000573694 PRKCEQ02156 737 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 TBX2Q13207 712 aaPredicted RBP10.54□□□□□ -0.72
NDE1-208ENST00000573694 IKBKEQ14164 716 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 AAK1Q2M2I8 961 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 TMEM63BQ5T3F8 832 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 TAF2Q6P1X5 1199 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 PADI6Q6TGC4 694 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 LRRC8DQ7L1W4 858 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 CYFIP1Q7L576 1253 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 MAEAQ7L5Y9 396 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 OTOP2Q7RTS6 562 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 TRMT1LQ7Z2T5 733 aaKnown RBP10.54□□□□□ -0.72
NDE1-208ENST00000573694 C4orf19Q8IY42 314 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 SMAP1Q8IYB5 467 aaPredicted RBP10.54□□□□□ -0.72
NDE1-208ENST00000573694 NOC3LQ8WTT2 800 aaKnown RBP10.54□□□□□ -0.72
NDE1-208ENST00000573694 APBB2Q92870 758 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 COPS5Q92905 334 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 FIZ1Q96SL8 496 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 TSG101Q99816 390 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 C16orf70Q9BSU1 422 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 KCTD10Q9H3F6 313 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 RNF216Q9NWF9 866 aaPredicted RBP10.54□□□□□ -0.72
NDE1-208ENST00000573694 PCDHA10Q9Y5I2 948 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 COL4A3BPQ9Y5P4 624 aa10.54□□□□□ -0.72
NDE1-208ENST00000573694 RRN3P2A6NIE6 340 aa10.53□□□□□ -0.72
NDE1-208ENST00000573694 LGALS16A8MUM7 142 aa10.53□□□□□ -0.72
NDE1-208ENST00000573694 N4BP3O15049 544 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms