RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 CCDC149Q6ZUS6 474 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 FRMD7Q6ZUT3 714 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 OVCH2Q7RTZ1 564 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 SAPCD2Q86UD0 394 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 MYLK4Q86YV6 388 aaPredicted RBP3.83□□□□□ -1.8
CNOT1-221ENST00000569924 RTKN2Q8IZC4 609 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 DEPTORQ8TB45 409 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 ENOX1Q8TC92 643 aaKnown RBP3.83□□□□□ -1.8
CNOT1-221ENST00000569924 C1GALT1C1Q96EU7 318 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 COX4I2Q96KJ9 171 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 SGCZQ96LD1 299 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 ACAP3Q96P50 834 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 PSMG3-AS1Q96PY0 264 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 CDC5LQ99459 802 aaKnown RBP3.83□□□□□ -1.8
CNOT1-221ENST00000569924 MAP3K14Q99558 947 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 ELF4Q99607 663 aaPredicted RBP3.83□□□□□ -1.8
CNOT1-221ENST00000569924 GTPBP4Q9BZE4 634 aaKnown RBP3.83□□□□□ -1.8
CNOT1-221ENST00000569924 ASCC2Q9H1I8 757 aaPredicted RBP3.83□□□□□ -1.8
CNOT1-221ENST00000569924 TMEM60Q9H2L4 133 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 TAF1DQ9H5J8 278 aaPredicted RBP3.83□□□□□ -1.8
CNOT1-221ENST00000569924 RSAD1Q9HA92 442 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 JADE2Q9NQC1 790 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 PRDM10Q9NQV6 1147 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 TOMM22Q9NS69 142 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 CLEC1BQ9P126 229 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 FNIP2Q9P278 1114 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 KCNH3Q9ULD8 1083 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 MINPP1Q9UNW1 487 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 PCDHA2Q9Y5H9 948 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 PCDHA11Q9Y5I1 949 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 DGKBQ9Y6T7 804 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 KIF7Q2M1P5 1343 aa3.83□□□□□ -1.8
CNOT1-221ENST00000569924 CACNA1GO43497 2377 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 ADAMTSL1Q8N6G6 1762 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 TRBV23OR9-2A0A075B6M9 112 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 SLC12A8A0AV02 714 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 BTBD11A6QL63 1104 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 FAM227AF5H4B4 570 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 H3BML4 177 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 ZNF561-AS1K7EIQ3 104 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 FOXN1O15353 648 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 HTATSF1O43719 755 aaKnown RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 TUSC2O75896 110 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 KRT37O76014 449 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 SNRPA1P09661 255 aaKnown RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 MYBP10242 640 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 NID1P14543 1247 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 IFNGR1P15260 489 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 PDE6AP16499 860 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 PAMP19021 973 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 AGXTP21549 392 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 C5AR1P21730 350 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 TPP2P29144 1249 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 GRK3P35626 688 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 DDIT3P35638 169 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 CTCFP49711 727 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 IFIT5Q13325 482 aaKnown RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 SEMA5AQ13591 1074 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 COL9A3Q14050 684 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 ELF2Q15723 593 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 PDCD2Q16342 344 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 KIAA0753Q2KHM9 967 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 CC2D1BQ5T0F9 858 aaKnown RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 DARS2Q6PI48 645 aaKnown RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 CHSY3Q70JA7 882 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 OSTM1Q86WC4 334 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 NBPF5PQ86XG9 351 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 FBXO11Q86XK2 927 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 KSR1Q8IVT5 923 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 GRAMD1CQ8IYS0 662 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 KIAA1958Q8N8K9 716 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 DTWD2Q8NBA8 298 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 DAGLBQ8NCG7 672 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 TGFBRAP1Q8WUH2 860 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 TBCBQ99426 244 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 MTA3Q9BTC8 594 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 SLC12A9Q9BXP2 914 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 INO80BQ9C086 356 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 CDIP1Q9H305 208 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 SMOC1Q9H4F8 434 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 ACSS3Q9H6R3 686 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 ZNF277Q9NRM2 450 aaPredicted RBP3.82□□□□□ -1.8
CNOT1-221ENST00000569924 DNAJC28Q9NX36 388 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 NRBP1Q9UHY1 535 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 HACL1Q9UJ83 578 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 USP16Q9Y5T5 823 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 GPR45Q9Y5Y3 372 aa3.82□□□□□ -1.8
CNOT1-221ENST00000569924 CACNA1SQ13698 1873 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 SNED1Q8TER0 1413 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 ZNF541Q9H0D2 1346 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 NPHP3-ACAD11A0A0J9YXS1 232 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 NRG2O14511 850 aaPredicted RBP3.81□□□□□ -1.8
CNOT1-221ENST00000569924 DVL2O14641 736 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 KCNQ3O43525 872 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 CYP17A1P05093 508 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 LDHCP07864 332 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 VAV1P15498 845 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 PDCP20941 246 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 ALDH1B1P30837 517 aa3.81□□□□□ -1.8
CNOT1-221ENST00000569924 PRKAR2BP31323 418 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms