RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 METTL13Q8N6R0 699 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 ASAP3Q8TDY4 903 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 SPIRE2Q8WWL2 714 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 PRIMPOLQ96LW4 560 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 NTPCRQ9BSD7 190 aaKnown RBP7.71□□□□□ -1.18
SMG1-215ENST00000568239 NIFKQ9BYG3 293 aaKnown RBP7.71□□□□□ -1.18
SMG1-215ENST00000568239 ST6GALNAC4Q9H4F1 302 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 TFR2Q9UP52 801 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.71□□□□□ -1.18
SMG1-215ENST00000568239 MANSC4A6NHS7 340 aaPredicted RBP7.71□□□□□ -1.18
SMG1-215ENST00000568239 SRGAP2CP0DJJ0 459 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 FECHP22830 423 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 GLRA2P23416 452 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 FMO5P49326 533 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 DLG4P78352 724 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 MEA1Q16626 185 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 NFIL3Q16649 462 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 CBWD6Q4V339 395 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 CBWD3Q5JTY5 395 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 CBWD5Q5RIA9 395 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 SFMBT2Q5VUG0 894 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 TAPT1Q6NXT6 567 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 PDXDC1Q6P996 788 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 INTS8Q75QN2 995 aaKnown RBP7.71□□□□□ -1.18
SMG1-215ENST00000568239 CBWD2Q8IUF1 395 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 SLC9A9Q8IVB4 645 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 ABRAQ8N0Z2 381 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 AFAP1L1Q8TED9 768 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 AFG1LQ8WV93 481 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 BBXQ8WY36 941 aaPredicted RBP7.71□□□□□ -1.18
SMG1-215ENST00000568239 BAP1Q92560 729 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 ZBTB10Q96DT7 871 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 BORCS6Q96GS4 357 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 MAML3Q96JK9 1138 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 FAM167AQ96KS9 214 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 SMARCAD1Q9H4L7 1026 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 GPBP1L1Q9HC44 474 aaPredicted RBP7.71□□□□□ -1.18
SMG1-215ENST00000568239 GUCA1BQ9UMX6 200 aa7.71□□□□□ -1.18
SMG1-215ENST00000568239 TRPM7Q96QT4 1865 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 SNAI1O95863 264 aaPredicted RBP7.7□□□□□ -1.18
SMG1-215ENST00000568239 ABL1P00519 1130 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 GH1P01241 217 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 ZNF286BP0CG31 522 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 HARSP12081 509 aaKnown RBP7.7□□□□□ -1.18
SMG1-215ENST00000568239 UCHL3P15374 230 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 ADSSP30520 456 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 RFC5P40937 340 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 GCLMP48507 274 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 VAMP7P51809 220 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 LAMC2Q13753 1193 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 GRB14Q14449 540 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 PLCB4Q15147 1175 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 PPP2R5AQ15172 486 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 SPA17Q15506 151 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 SNRNP35Q16560 246 aaKnown RBP7.7□□□□□ -1.18
SMG1-215ENST00000568239 SLC9C1Q4G0N8 1177 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 PRAMEF19Q5SWL8 479 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 GJB7Q6PEY0 223 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 NPLOC4Q8TAT6 608 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 MORC4Q8TE76 937 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 ATP8B4Q8TF62 1192 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 TINF2Q9BSI4 451 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.7□□□□□ -1.18
SMG1-215ENST00000568239 VTA1Q9NP79 307 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 SLC5A4Q9NY91 659 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 ARHGAP20Q9P2F6 1191 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 ANKFY1Q9P2R3 1169 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 DIS3Q9Y2L1 958 aaKnown RBP7.7□□□□□ -1.18
SMG1-215ENST00000568239 FHOD1Q9Y613 1164 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 EVPLQ92817 2033 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 EMSYQ7Z589 1322 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 LRRC37A2A6NM11 1700 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 LOC102724159A0A0B4J2E5 919 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 H0YCG3 227 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 KIF5CO60282 957 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 URI1O94763 535 aaPredicted RBP7.7□□□□□ -1.18
SMG1-215ENST00000568239 DLATP10515 647 aaKnown RBP7.7□□□□□ -1.18
SMG1-215ENST00000568239 CYP2B6P20813 491 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 EIF4A3P38919 411 aaKnown RBP7.7□□□□□ -1.18
SMG1-215ENST00000568239 RTP1P59025 263 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 KRT83P78385 493 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 MYL7Q01449 175 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 CETN1Q12798 172 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 PWP2Q15269 919 aaKnown RBP7.7□□□□□ -1.18
SMG1-215ENST00000568239 KLHDC7AQ5VTJ3 777 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 TRIM65Q6PJ69 517 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 PLPPR4Q7Z2D5 763 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 RHPN2Q8IUC4 686 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 PRPF31Q8WWY3 499 aaKnown RBP7.7□□□□□ -1.18
SMG1-215ENST00000568239 FAM213AQ9BRX8 229 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 RNPEPQ9H4A4 650 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 ERAP1Q9NZ08 941 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 CGNQ9P2M7 1197 aaKnown RBP7.7□□□□□ -1.18
SMG1-215ENST00000568239 ARHGAP28Q9P2N2 729 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 TRIM10Q9UDY6 481 aa7.7□□□□□ -1.18
SMG1-215ENST00000568239 SPDYE4A6NLX3 237 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 CLSTN1O94985 981 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 GJB1P08034 283 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 CASQ1P31415 396 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 ARL2P36404 184 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms