RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 COL25A1Q9BXS0 654 aaPredicted RBP25.29■■□□□ 1.64
SPG7-217ENST00000568151 LMAN2LQ9H0V9 348 aa25.29■■□□□ 1.64
SPG7-217ENST00000568151 FAM105AQ9NUU6 356 aa25.29■■□□□ 1.64
SPG7-217ENST00000568151 KIAA1024Q9UPX6 916 aa25.29■■□□□ 1.64
SPG7-217ENST00000568151 PLXNA4Q9HCM2 1894 aa25.28■■□□□ 1.64
SPG7-217ENST00000568151 CDC25AP30304 524 aa25.28■■□□□ 1.64
SPG7-217ENST00000568151 TIGD5Q53EQ6 642 aa25.28■■□□□ 1.64
SPG7-217ENST00000568151 MCPH1Q8NEM0 835 aa25.28■■□□□ 1.64
SPG7-217ENST00000568151 SPPL3Q8TCT6 385 aa25.28■■□□□ 1.64
SPG7-217ENST00000568151 ASB2Q96Q27 587 aa25.28■■□□□ 1.64
SPG7-217ENST00000568151 MMTAG2Q9BU76 263 aaKnown RBP25.28■■□□□ 1.64
SPG7-217ENST00000568151 STK24Q9Y6E0 443 aa25.28■■□□□ 1.64
SPG7-217ENST00000568151 ARHGEF35A5YM69 484 aa25.27■■□□□ 1.64
SPG7-217ENST00000568151 ZNF623O75123 536 aa25.27■■□□□ 1.64
SPG7-217ENST00000568151 CYP11B2P19099 503 aa25.27■■□□□ 1.64
SPG7-217ENST00000568151 DNAJB1P25685 340 aa25.27■■□□□ 1.64
SPG7-217ENST00000568151 MRPS5P82675 430 aaKnown RBP25.27■■□□□ 1.64
SPG7-217ENST00000568151 MBTD1Q05BQ5 628 aa25.27■■□□□ 1.64
SPG7-217ENST00000568151 TJAP1Q5JTD0 557 aa25.27■■□□□ 1.64
SPG7-217ENST00000568151 SPOUT1Q5T280 376 aaKnown RBP25.27■■□□□ 1.64
SPG7-217ENST00000568151 ABI1Q8IZP0 508 aa25.27■■□□□ 1.64
SPG7-217ENST00000568151 HELQQ8TDG4 1101 aa25.27■■□□□ 1.64
SPG7-217ENST00000568151 LPPQ93052 612 aa25.27■■□□□ 1.64
SPG7-217ENST00000568151 INTS4Q96HW7 963 aaKnown RBP25.27■■□□□ 1.64
SPG7-217ENST00000568151 NFKBIZQ9BYH8 718 aa25.27■■□□□ 1.64
SPG7-217ENST00000568151 DDX19AQ9NUU7 478 aaKnown RBP25.27■■□□□ 1.64
SPG7-217ENST00000568151 COG5Q9UP83 839 aa25.27■■□□□ 1.64
SPG7-217ENST00000568151 VPS37CA5D8V6 355 aaPredicted RBP25.26■■□□□ 1.63
SPG7-217ENST00000568151 MEIS3P2A8K0S8 358 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 INO80B-WBP1J3KQ70 363 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 K7ELQ4 463 aaPredicted RBP25.26■■□□□ 1.63
SPG7-217ENST00000568151 TSPAN1O60635 241 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 SKIP12755 728 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 RAB27AP51159 221 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 TCEAL5Q5H9L2 206 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 UBXN11Q5T124 520 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 KRT79Q5XKE5 535 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 BRAPQ7Z569 592 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 LRRC43Q8N309 656 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 COLGALT1Q8NBJ5 622 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 HLA-CQ95604 372 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 BHMT2Q9H2M3 363 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 NSUN3Q9H649 340 aaKnown RBP25.26■■□□□ 1.63
SPG7-217ENST00000568151 AAASQ9NRG9 546 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 PCDHB2Q9Y5E7 798 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 PCDHB12Q9Y5F1 795 aa25.26■■□□□ 1.63
SPG7-217ENST00000568151 ERLIN2O94905 339 aa25.25■■□□□ 1.63
SPG7-217ENST00000568151 PDCP20941 246 aa25.25■■□□□ 1.63
SPG7-217ENST00000568151 PCBP1Q15365 356 aaKnown RBP eCLIP25.25■■□□□ 1.63
SPG7-217ENST00000568151 AMHR2Q16671 573 aa25.25■■□□□ 1.63
SPG7-217ENST00000568151 LONRF3Q496Y0 759 aa25.25■■□□□ 1.63
SPG7-217ENST00000568151 BSNDQ8WZ55 320 aa25.25■■□□□ 1.63
SPG7-217ENST00000568151 CSPG5O95196 566 aa25.24■■□□□ 1.63
SPG7-217ENST00000568151 LAG3P18627 525 aa25.24■■□□□ 1.63
SPG7-217ENST00000568151 SYT1P21579 422 aa25.24■■□□□ 1.63
SPG7-217ENST00000568151 ARL6IP4Q66PJ3 421 aaKnown RBP25.24■■□□□ 1.63
SPG7-217ENST00000568151 TTC28Q96AY4 2481 aa25.23■■□□□ 1.63
SPG7-217ENST00000568151 VWA3AA6NCI4 1184 aa25.23■■□□□ 1.63
SPG7-217ENST00000568151 LRRIQ4A6NIV6 560 aa25.23■■□□□ 1.63
SPG7-217ENST00000568151 E9PMD0 336 aa25.23■■□□□ 1.63
SPG7-217ENST00000568151 KCNK18Q7Z418 384 aa25.23■■□□□ 1.63
SPG7-217ENST00000568151 MRPL10Q7Z7H8 261 aaKnown RBP25.23■■□□□ 1.63
SPG7-217ENST00000568151 POF1BQ8WVV4 589 aa25.23■■□□□ 1.63
SPG7-217ENST00000568151 SNX21Q969T3 373 aa25.23■■□□□ 1.63
SPG7-217ENST00000568151 CPB2Q96IY4 423 aa25.23■■□□□ 1.63
SPG7-217ENST00000568151 FOXD4L1Q9NU39 408 aa25.23■■□□□ 1.63
SPG7-217ENST00000568151 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.22■■□□□ 1.63
SPG7-217ENST00000568151 FGF18O76093 207 aa25.22■■□□□ 1.63
SPG7-217ENST00000568151 EYA4O95677 639 aa25.22■■□□□ 1.63
SPG7-217ENST00000568151 AXLP30530 894 aa25.22■■□□□ 1.63
SPG7-217ENST00000568151 IRS1P35568 1242 aa25.22■■□□□ 1.63
SPG7-217ENST00000568151 KCNQ1P51787 676 aa25.22■■□□□ 1.63
SPG7-217ENST00000568151 CSPP1Q1MSJ5 1256 aa25.22■■□□□ 1.63
SPG7-217ENST00000568151 CDCA2Q69YH5 1023 aaPredicted RBP25.22■■□□□ 1.63
SPG7-217ENST00000568151 UBE2ZQ9H832 354 aaPredicted RBP25.22■■□□□ 1.63
SPG7-217ENST00000568151 POLD4Q9HCU8 107 aa25.22■■□□□ 1.63
SPG7-217ENST00000568151 DNM3Q9UQ16 869 aa25.22■■□□□ 1.63
SPG7-217ENST00000568151 TCF20Q9UGU0 1960 aaKnown RBP25.22■■□□□ 1.63
SPG7-217ENST00000568151 B4GALT5O43286 388 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 OFD1O75665 1012 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 BMP1P13497 986 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 ARF4P18085 180 aaPredicted RBP25.21■■□□□ 1.63
SPG7-217ENST00000568151 PBX3P40426 434 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 COL19A1Q14993 1142 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 AAK1Q2M2I8 961 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 HYIQ5T013 277 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 NOTUMQ6P988 496 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 KCNT2Q6UVM3 1135 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 AGMOQ6ZNB7 445 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 THNSL1Q8IYQ7 743 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 SMG8Q8ND04 991 aaKnown RBP25.21■■□□□ 1.63
SPG7-217ENST00000568151 PGBD4Q96DM1 585 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 CCDC51Q96ER9 411 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 PNMA5Q96PV4 448 aa25.21■■□□□ 1.63
SPG7-217ENST00000568151 EIF2AQ9BY44 585 aaKnown RBP25.21■■□□□ 1.63
SPG7-217ENST00000568151 MRPL9Q9BYD2 267 aaKnown RBP25.21■■□□□ 1.63
SPG7-217ENST00000568151 UBE3AQ05086 875 aa25.2■■□□□ 1.62
SPG7-217ENST00000568151 RESTQ13127 1097 aa25.2■■□□□ 1.62
SPG7-217ENST00000568151 SF3A1Q15459 793 aaKnown RBP25.2■■□□□ 1.62
SPG7-217ENST00000568151 GLB1LQ6UWU2 654 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms