RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 GNL2Q13823 731 aaKnown RBP12.46□□□□□ -0.41
CDH3-206ENST00000567674 EMC2Q15006 297 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 RILPL1Q5EBL4 403 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 TCEAL5Q5H9L2 206 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 FAM102BQ5T8I3 360 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 TMEM184AQ6ZMB5 413 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 CATSPER4Q7RTX7 472 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 PRIMPOLQ96LW4 560 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 FBXL18Q96ME1 805 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 CWH43Q9H720 699 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 CD320Q9NPF0 282 aa12.46□□□□□ -0.41
CDH3-206ENST00000567674 TYW1Q9NV66 732 aaKnown RBP12.46□□□□□ -0.41
CDH3-206ENST00000567674 WRAP73Q9P2S5 460 aaPredicted RBP12.46□□□□□ -0.41
CDH3-206ENST00000567674 NLRC5Q86WI3 1866 aa12.46□□□□□ -0.42
CDH3-206ENST00000567674 LOXHD1Q8IVV2 1947 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 GRXCR2A6NFK2 248 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 INPPL1O15357 1258 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 FGF18O76093 207 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 C1RP00736 705 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 SPATA31C1P0DKV0 1188 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 SRGAP2BP0DMP2 458 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 ALDH7A1P49419 539 aaKnown RBP12.45□□□□□ -0.42
CDH3-206ENST00000567674 ADAM15Q13444 863 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 DRP2Q13474 957 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 CAMK1Q14012 370 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 TTC38Q5R3I4 469 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 TWF2Q6IBS0 349 aaKnown RBP12.45□□□□□ -0.42
CDH3-206ENST00000567674 GLB1LQ6UWU2 654 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 CATSPER3Q86XQ3 398 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 HACE1Q8IYU2 909 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 EFHBQ8N7U6 833 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 COLGALT1Q8NBJ5 622 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 POF1BQ8WVV4 589 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 MRPS27Q92552 414 aaKnown RBP12.45□□□□□ -0.42
CDH3-206ENST00000567674 CCDC43Q96MW1 224 aaKnown RBP12.45□□□□□ -0.42
CDH3-206ENST00000567674 ZNF558Q96NG5 402 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 TBC1D32Q96NH3 1257 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 TLR9Q9NR96 1032 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 FAM105AQ9NUU6 356 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 IRAK3Q9Y616 596 aa12.45□□□□□ -0.42
CDH3-206ENST00000567674 FSCN2O14926 492 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 EYA4O95677 639 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 PDIA4P13667 645 aaKnown RBP12.44□□□□□ -0.42
CDH3-206ENST00000567674 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
CDH3-206ENST00000567674 SCP2P22307 547 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 HOXA11P31270 313 aaPredicted RBP12.44□□□□□ -0.42
CDH3-206ENST00000567674 MCM7P33993 719 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 CYP4A11Q02928 519 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 COASYQ13057 564 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 CTTNQ14247 550 aaKnown RBP12.44□□□□□ -0.42
CDH3-206ENST00000567674 FAM187BQ17R55 369 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 SPOUT1Q5T280 376 aaKnown RBP12.44□□□□□ -0.42
CDH3-206ENST00000567674 ARL6IP4Q66PJ3 421 aaKnown RBP12.44□□□□□ -0.42
CDH3-206ENST00000567674 PLA2G4FQ68DD2 849 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 NOTUMQ6P988 496 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 KCNT2Q6UVM3 1135 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 GPR65Q8IYL9 337 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 IGSF22Q8N9C0 903 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 RNF149Q8NC42 400 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 TMX3Q96JJ7 454 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 NLRP4Q96MN2 994 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 POP1Q99575 1024 aaKnown RBP12.44□□□□□ -0.42
CDH3-206ENST00000567674 TMEM175Q9BSA9 504 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 TIPINQ9BVW5 301 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 C2orf40Q9H1Z8 148 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 C17orf75Q9HAS0 396 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 RNF19AQ9NV58 838 aa12.44□□□□□ -0.42
CDH3-206ENST00000567674 PIN4Q9Y237 131 aaKnown RBP12.44□□□□□ -0.42
CDH3-206ENST00000567674 FNDC1Q4ZHG4 1894 aaPredicted RBP12.44□□□□□ -0.42
CDH3-206ENST00000567674 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 ERLIN2O94905 339 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 BMP15O95972 392 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 HOXB8P17481 243 aaPredicted RBP12.43□□□□□ -0.42
CDH3-206ENST00000567674 ATF7P17544 494 aaPredicted RBP12.43□□□□□ -0.42
CDH3-206ENST00000567674 HYAL1Q12794 435 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 PPP2R5AQ15172 486 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 FAM178BQ8IXR5 827 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 THNSL1Q8IYQ7 743 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 GJD3Q8N144 294 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 C4orf32Q8N8J7 132 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.43□□□□□ -0.42
CDH3-206ENST00000567674 TMEM143Q96AN5 459 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 TMEM60Q9H2L4 133 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 ALG13Q9NP73 1137 aaKnown RBP12.43□□□□□ -0.42
CDH3-206ENST00000567674 XPNPEP1Q9NQW7 623 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 KCND2Q9NZV8 630 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 SSX2IPQ9Y2D8 614 aa12.43□□□□□ -0.42
CDH3-206ENST00000567674 A0A1B0GUA9 196 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 TMEM150BA6NC51 233 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 OFD1O75665 1012 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 SRGAP2CP0DJJ0 459 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 FGFR1P11362 822 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 CYP11B2P19099 503 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 PDCP20941 246 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 KCNA5P22460 613 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 TECP42680 631 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 EFNA5P52803 228 aa12.42□□□□□ -0.42
CDH3-206ENST00000567674 SMAD2Q15796 467 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms