RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 MCM6Q14566 821 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 ARSHQ5FYA8 562 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 RESP18Q5W5W9 173 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 GPBP1Q86WP2 473 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 NPAS4Q8IUM7 802 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 ZBTB8OSQ8IWT0 167 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 RAD9AQ99638 391 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 KCNG1Q9UIX4 513 aa23.3■■□□□ 1.32
SHCBP1-205ENST00000566016 FNDC1Q4ZHG4 1894 aaPredicted RBP23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 TLL1O43897 1013 aa23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 AXLP30530 894 aa23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 PBX2P40425 430 aa23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 RABGGTBP53611 331 aa23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 DMP1Q13316 513 aaPredicted RBP23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 TIFAQ96CG3 184 aa23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 CHAMP1Q96JM3 812 aa23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 PRIMPOLQ96LW4 560 aa23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 ZBED2Q9BTP6 218 aa23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 CUEDC2Q9H467 287 aa23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 INSL6Q9Y581 213 aa23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 TRANK1O15050 2925 aa23.29■■□□□ 1.32
SHCBP1-205ENST00000566016 PHLPP2Q6ZVD8 1323 aa23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 INO80B-WBP1J3KQ70 363 aa23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 ERLIN2O94905 339 aa23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 STAG3L1P0CL83 205 aa23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 EFNA5P52803 228 aa23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 FAM189BP81408 668 aa23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 FAM187BQ17R55 369 aa23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 ADALQ6DHV7 355 aa23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 PPP4R3CPQ6ZMV5 832 aa23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 TMCO2Q7Z6W1 182 aaPredicted RBP23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 DEPTORQ8TB45 409 aa23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 PYM1Q9BRP8 204 aaKnown RBP23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 ELAC1Q9H777 363 aaKnown RBP23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 PIN4Q9Y237 131 aaKnown RBP23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 YBX2Q9Y2T7 364 aaKnown RBP23.28■■□□□ 1.32
SHCBP1-205ENST00000566016 RALGAPA2Q2PPJ7 1873 aa23.27■■□□□ 1.32
SHCBP1-205ENST00000566016 E2F4Q16254 413 aa23.27■■□□□ 1.32
SHCBP1-205ENST00000566016 AMHR2Q16671 573 aa23.27■■□□□ 1.32
SHCBP1-205ENST00000566016 SP7Q8TDD2 431 aaPredicted RBP23.27■■□□□ 1.32
SHCBP1-205ENST00000566016 SPIRE2Q8WWL2 714 aa23.27■■□□□ 1.32
SHCBP1-205ENST00000566016 CCDC51Q96ER9 411 aa23.27■■□□□ 1.32
SHCBP1-205ENST00000566016 REEP2Q9BRK0 252 aa23.27■■□□□ 1.32
SHCBP1-205ENST00000566016 NTPCRQ9BSD7 190 aaKnown RBP23.27■■□□□ 1.32
SHCBP1-205ENST00000566016 RC3H2Q9HBD1 1191 aaKnown RBP23.27■■□□□ 1.32
SHCBP1-205ENST00000566016 PRMT7Q9NVM4 692 aaPredicted RBP23.27■■□□□ 1.32
SHCBP1-205ENST00000566016 FAM13BQ9NYF5 915 aa23.27■■□□□ 1.32
SHCBP1-205ENST00000566016 ADGRA3Q8IWK6 1321 aa23.27■■□□□ 1.31
SHCBP1-205ENST00000566016 NLRC5Q86WI3 1866 aa23.27■■□□□ 1.31
SHCBP1-205ENST00000566016 A0A0U1RQF3 1178 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 TSPAN1O60635 241 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 PLS3P13797 630 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 HOXA11P31270 313 aaPredicted RBP23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 NPTX2P47972 431 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 ZNF131P52739 623 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 NCBP1Q09161 790 aaKnown RBP23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 SV2BQ7L1I2 683 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 PDILTQ8N807 584 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 IQUBQ8NA54 791 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 KCNN1Q92952 543 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 CCDC113Q9H0I3 377 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 FZD8Q9H461 694 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 TMEM161AQ9NX61 479 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 LARSQ9P2J5 1176 aaKnown RBP23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 ARHGAP28Q9P2N2 729 aa23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 RBM19Q9Y4C8 960 aaKnown RBP23.26■■□□□ 1.31
SHCBP1-205ENST00000566016 SKIP12755 728 aa23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 SCP2P22307 547 aa23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 CMA1P23946 247 aa23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 RAB27AP51159 221 aa23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 PEX3P56589 373 aa23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 MAPK6Q16659 721 aa23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 TWF2Q6IBS0 349 aaKnown RBP23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 YME1L1Q96TA2 773 aa23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 TNMDQ9H2S6 317 aa23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 MAGEF1Q9HAY2 307 aa23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 CHMP5Q9NZZ3 219 aa23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 CNTNAP2Q9UHC6 1331 aa23.25■■□□□ 1.31
SHCBP1-205ENST00000566016 DGKIO75912 1065 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 UPP2O95045 317 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 CA3P07451 260 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 RAD51AP2Q09MP3 1159 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 GIT2Q14161 759 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 DHX8Q14562 1220 aaKnown RBP23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 ZNF697Q5TEC3 545 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 FAM117BQ6P1L5 589 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 NOTUMQ6P988 496 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 ZNF689Q96CS4 500 aaPredicted RBP23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 SLC28A3Q9HAS3 691 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 PARVGQ9HBI0 331 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 POLD4Q9HCU8 107 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 A0A1W2PQ27 194 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 A0A1W2PQ64 194 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 A0A1W2PQD8 194 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 EOMESO95936 686 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 MYOGP15173 224 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 SMTNP53814 917 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 ECHDC2Q86YB7 292 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 RSPH1Q8WYR4 309 aa23.24■■□□□ 1.31
SHCBP1-205ENST00000566016 KIFC3Q9BVG8 833 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms