RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 PDE4CQ08493 712 aa6.84□□□□□ -1.32
CHD9-217ENST00000565832 KCNMA1Q12791 1236 aa6.84□□□□□ -1.32
CHD9-217ENST00000565832 MTERF2Q49AM1 385 aa6.84□□□□□ -1.32
CHD9-217ENST00000565832 CCDC40Q4G0X9 1142 aa6.84□□□□□ -1.32
CHD9-217ENST00000565832 RAD9BQ6WBX8 426 aa6.84□□□□□ -1.32
CHD9-217ENST00000565832 NOC3LQ8WTT2 800 aaKnown RBP6.84□□□□□ -1.32
CHD9-217ENST00000565832 TMEM143Q96AN5 459 aa6.84□□□□□ -1.32
CHD9-217ENST00000565832 CDHR1Q96JP9 859 aa6.84□□□□□ -1.32
CHD9-217ENST00000565832 CCDC43Q96MW1 224 aaKnown RBP6.84□□□□□ -1.32
CHD9-217ENST00000565832 MROH8Q9H579 483 aa6.84□□□□□ -1.32
CHD9-217ENST00000565832 VRTNQ9H8Y1 702 aa6.84□□□□□ -1.32
CHD9-217ENST00000565832 MLXIPQ9HAP2 919 aa6.84□□□□□ -1.32
CHD9-217ENST00000565832 TFR2Q9UP52 801 aa6.84□□□□□ -1.32
CHD9-217ENST00000565832 R3HCC1Q9Y3T6 440 aaKnown RBP6.84□□□□□ -1.32
CHD9-217ENST00000565832 NFASCO94856 1347 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 K7ENM7 598 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 STAM2O75886 525 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 S1PR4O95977 384 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 NR3C1P04150 777 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 GAP43P17677 238 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 TRIM21P19474 475 aaKnown RBP6.83□□□□□ -1.32
CHD9-217ENST00000565832 TCF7P36402 384 aaPredicted RBP6.83□□□□□ -1.32
CHD9-217ENST00000565832 CYP2J2P51589 502 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 DRP2Q13474 957 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 MIS18BP1Q6P0N0 1132 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 SAPCD2Q86UD0 394 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 SMAP1Q8IYB5 467 aaPredicted RBP6.83□□□□□ -1.32
CHD9-217ENST00000565832 NEK9Q8TD19 979 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 PPP1R13LQ8WUF5 828 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 STRA6Q9BX79 667 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 GTPBP4Q9BZE4 634 aaKnown RBP6.83□□□□□ -1.32
CHD9-217ENST00000565832 MMRN2Q9H8L6 949 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 XPNPEP1Q9NQW7 623 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 ZNF302Q9NR11 478 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 CYP26B1Q9NR63 512 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 ABHD10Q9NUJ1 306 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 ODF2LQ9ULJ1 636 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 TRAF3IP3Q9Y228 551 aa6.83□□□□□ -1.32
CHD9-217ENST00000565832 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 PDXKO00764 312 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 CETN3O15182 167 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 LRRN2O75325 713 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 TXNP10599 105 aaKnown RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 ACTN1P12814 892 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 PLS3P13797 630 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 NPTX2P47972 431 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 FKBP1BP68106 108 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 MAN2A1Q16706 1144 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 BMT2Q1RMZ1 405 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 PRAMEF19Q5SWL8 479 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 WDR59Q6PJI9 974 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 ARMCX2Q7L311 632 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 HAUS6Q7Z4H7 955 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 GPR142Q7Z601 462 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 ANKRD23Q86SG2 305 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 FAM114A1Q8IWE2 563 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 TRIM59Q8IWR1 403 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 SYCP3Q8IZU3 236 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 ZNF592Q92610 1267 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 ATP6V0A1Q93050 837 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 ZNF668Q96K58 619 aaPredicted RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 PPP1R13BQ96KQ4 1090 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 IRX2Q9BZI1 471 aaPredicted RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 PDLIM7Q9NR12 457 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 AGPAT3Q9NRZ7 376 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 ANKEF1Q9NU02 776 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 TYW1Q9NV66 732 aaKnown RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 KCND2Q9NZV8 630 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 SIK3Q9Y2K2 1263 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.82□□□□□ -1.327e-7■■□□□ 11.9
CHD9-217ENST00000565832 EVPLQ92817 2033 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 ITIH6Q6UXX5 1313 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 ADGRA3Q8IWK6 1321 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 IGKV6D-21A0A0A0MT36 114 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 A0A1W2PQC6 194 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 GOLGA8IPA6NC78 632 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 GOLGA8JA6NMD2 632 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 ANKRD63C9JTQ0 380 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 NOL4O94818 638 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 SNAI1O95863 264 aaPredicted RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 PLEKP08567 350 aaPredicted RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 ZBTB48P10074 688 aaPredicted RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 SLC9A1P19634 815 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 STAT5BP51692 787 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 DLG4P78352 724 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 EDRF1Q3B7T1 1238 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 ZNF792Q3KQV3 632 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 DCAF17Q5H9S7 520 aaPredicted RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 CELF3Q5SZQ8 465 aaKnown RBP6.82□□□□□ -1.32
CHD9-217ENST00000565832 TCERG1LQ5VWI1 586 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 TAPT1Q6NXT6 567 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 CCDC62Q6P9F0 684 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 OTUD6AQ7L8S5 288 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 ZBTB33Q86T24 672 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 DPP9Q86TI2 863 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 REXO1L1PQ8IX06 675 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 NPLOC4Q8TAT6 608 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 TRAPPC12Q8WVT3 735 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 GLG1Q92896 1179 aa6.82□□□□□ -1.32
CHD9-217ENST00000565832 FAM84AQ96KN4 292 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms