RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 BMT2Q1RMZ1 405 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 BRDTQ58F21 947 aaPredicted RBP10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 TMEM63BQ5T3F8 832 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 GJC2Q5T442 439 aaPredicted RBP10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 FAM102BQ5T8I3 360 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 TTI2Q6NXR4 508 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 EPM2AIP1Q7L775 607 aaPredicted RBP10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 DAW1Q8N136 415 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 ANKRD20A12PQ8NF67 263 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 SLC7A3Q8WY07 619 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 JPH2Q9BR39 696 aaPredicted RBP10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 AP5M1Q9H0R1 490 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 ACBD3Q9H3P7 528 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 ANKZF1Q9H8Y5 726 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 SRRDQ9UH36 339 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 GNEQ9Y223 722 aaKnown RBP10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 PCDHB13Q9Y5F0 798 aa10.31□□□□□ -0.76
CNEP1R1-206ENST00000565556 H3BQF6 201 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 TEX33O43247 280 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 FKTNO75072 461 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 GCNT3O95395 438 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 LGALS2P05162 132 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 MMP3P08254 477 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 AKR1A1P14550 325 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 CAPN2P17655 700 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 SCP2P22307 547 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 LMAN1P49257 510 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 SMTNP53814 917 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 HTRA3P83110 453 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 PLCB4Q15147 1175 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 LRRC41Q15345 812 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 ZNF569Q5MCW4 686 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 BEND6Q5SZJ8 279 aaPredicted RBP10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 ANKRD40Q6AI12 368 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 ZNF720Q7Z2F6 126 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 TLK2Q86UE8 772 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 TMTC1Q8IUR5 882 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 FAM114A1Q8IWE2 563 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 ZNF507Q8TCN5 953 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 SCFD1Q8WVM8 642 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 NAPGQ99747 312 aaPredicted RBP10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 SH2D3AQ9BRG2 576 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 THAP9Q9H5L6 903 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 DHX33Q9H6R0 707 aaKnown RBP10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 ADAM21Q9UKJ8 722 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 CTAGE15A4D2H0 777 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 A6NJR5 290 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 H0YCG3 227 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 DYNC1LI2O43237 492 aaPredicted RBP10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 IVLP07476 585 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 CTAGE8P0CG41 777 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 CPT1AP50416 773 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 PRMT2P55345 433 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 MAP2K1Q02750 393 aaPredicted RBP10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 TBC1D8BQ0IIM8 1120 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 DMP1Q13316 513 aaPredicted RBP10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 EMC2Q15006 297 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 KNOP1Q1ED39 458 aaKnown RBP10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 ZNF484Q5JVG2 852 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 CYP26C1Q6V0L0 522 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 LEKR1Q6ZMV7 388 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 MAEAQ7L5Y9 396 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 CTAGE6Q86UF2 777 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 CTAGE4Q8IX94 777 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 CSGALNACT2Q8N6G5 542 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 CD99L2Q8TCZ2 262 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 SPIRE2Q8WWL2 714 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 TRIB2Q92519 343 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 IFT74Q96LB3 600 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 BEGAINQ9BUH8 593 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 SEMA6BQ9H3T3 888 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 ST6GALNAC4Q9H4F1 302 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 MAGEC2Q9UBF1 373 aaPredicted RBP10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 PUF60Q9UHX1 559 aaKnown RBP10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 TRPC6Q9Y210 931 aa10.3□□□□□ -0.76
CNEP1R1-206ENST00000565556 TRIM49BA6NDI0 452 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 H3BRB1 525 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 PDXKO00764 312 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 CALUO43852 315 aaPredicted RBP10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 DUSP11O75319 330 aaKnown RBP10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 MAFO75444 373 aaPredicted RBP10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 GYPCP04921 128 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 MYBP10242 640 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 CYBAP13498 195 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 MARK3P27448 753 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 NMT1P30419 496 aaKnown RBP10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 CASP5P51878 434 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 PMS1P54277 932 aaKnown RBP10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 FKBP3Q00688 224 aaKnown RBP10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 PPP2R5AQ15172 486 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 EDRF1Q3B7T1 1238 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 TRIM50Q86XT4 487 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 SLC35F6Q8N357 371 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 GLIS3Q8NEA6 775 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 TCP11Q8WWU5 503 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 HVCN1Q96D96 273 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 FIZ1Q96SL8 496 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 CEP89Q96ST8 783 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 DUSP9Q99956 384 aaKnown RBP10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 NTPCRQ9BSD7 190 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms