RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 TMEM143Q96AN5 459 aa27.52■■■□□ 2
LINC01003-201ENST00000564834 A0A0U1RQJ8 604 aa27.51■■□□□ 1.99
LINC01003-201ENST00000564834 ACTN1P12814 892 aa27.51■■□□□ 1.99
LINC01003-201ENST00000564834 ADSSP30520 456 aa27.51■■□□□ 1.99
LINC01003-201ENST00000564834 BRDTQ58F21 947 aaPredicted RBP27.51■■□□□ 1.99
LINC01003-201ENST00000564834 TAPT1Q6NXT6 567 aa27.51■■□□□ 1.99
LINC01003-201ENST00000564834 MAMDC4Q6UXC1 1216 aa27.51■■□□□ 1.99
LINC01003-201ENST00000564834 PLEKHH3Q7Z736 793 aa27.51■■□□□ 1.99
LINC01003-201ENST00000564834 ATRIPQ8WXE1 791 aa27.51■■□□□ 1.99
LINC01003-201ENST00000564834 ZCCHC17Q9NP64 241 aaKnown RBP27.51■■□□□ 1.99
LINC01003-201ENST00000564834 ANKRD63C9JTQ0 380 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 MAFO75444 373 aaPredicted RBP27.5■■□□□ 1.99
LINC01003-201ENST00000564834 TRIM49P0CI25 452 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 TRIM49CP0CI26 452 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 GLRA2P23416 452 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 ZNF157P51786 506 aaPredicted RBP27.5■■□□□ 1.99
LINC01003-201ENST00000564834 ZNF662Q6ZS27 426 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 DPP9Q86TI2 863 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 ATP8B4Q8TF62 1192 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.5■■□□□ 1.99
LINC01003-201ENST00000564834 MYO6Q9UM54 1294 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 SSU72P8A0A1W2PR75 194 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 RBM47A0AV96 593 aaKnown RBP27.5■■□□□ 1.99
LINC01003-201ENST00000564834 MANSC4A6NHS7 340 aaPredicted RBP27.5■■□□□ 1.99
LINC01003-201ENST00000564834 KIF5CO60282 957 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 PLEKP08567 350 aaPredicted RBP27.5■■□□□ 1.99
LINC01003-201ENST00000564834 VAMP7P51809 220 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 MAPK8IP2Q13387 824 aaPredicted RBP27.5■■□□□ 1.99
LINC01003-201ENST00000564834 TAS1R3Q7RTX0 852 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 TRIM50Q86XT4 487 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 ASAP3Q8TDY4 903 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 SMARCAD1Q9H4L7 1026 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 SIX2Q9NPC8 291 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 AIPL1Q9NZN9 384 aa27.5■■□□□ 1.99
LINC01003-201ENST00000564834 HNRNPDLO14979 420 aaKnown RBP27.49■■□□□ 1.99
LINC01003-201ENST00000564834 FANCGO15287 622 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 ARHGAP25P42331 645 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 MCCD1P59942 119 aaPredicted RBP27.49■■□□□ 1.99
LINC01003-201ENST00000564834 SLC9C1Q4G0N8 1177 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 CBWD6Q4V339 395 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 CBWD3Q5JTY5 395 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 CBWD5Q5RIA9 395 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 TMEM63BQ5T3F8 832 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 HGSNATQ68CP4 663 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 SLC39A4Q6P5W5 647 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 EXOC8Q8IYI6 725 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 WDR24Q96S15 920 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 HAUS4Q9H6D7 363 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 DOCK3Q8IZD9 2030 aa27.49■■□□□ 1.99
LINC01003-201ENST00000564834 GAS2O43903 313 aaKnown RBP27.48■■□□□ 1.99
LINC01003-201ENST00000564834 SERPING1P05155 500 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 MARK3P27448 753 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 EIF4A3P38919 411 aaKnown RBP27.48■■□□□ 1.99
LINC01003-201ENST00000564834 ARHGAP1Q07960 439 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 LAMC2Q13753 1193 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 KATNBL1Q9H079 304 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 DEF6Q9H4E7 631 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 FHOD1Q9Y613 1164 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 ADGRA2Q96PE1 1338 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 TLR2O60603 784 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 N4BP1O75113 896 aaKnown RBP27.48■■□□□ 1.99
LINC01003-201ENST00000564834 LCA5LO95447 670 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 GARTP22102 1010 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 KIF11P52732 1056 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 MYL7Q01449 175 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 RAPGEF1Q13905 1077 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 PLCB4Q15147 1175 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 DEPTORQ8TB45 409 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 MAML3Q96JK9 1138 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 L2HGDHQ9H9P8 463 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 MYO1AQ9UBC5 1043 aa27.48■■□□□ 1.99
LINC01003-201ENST00000564834 P4HA2O15460 535 aa27.47■■□□□ 1.99
LINC01003-201ENST00000564834 GH1P01241 217 aa27.47■■□□□ 1.99
LINC01003-201ENST00000564834 CASQ1P31415 396 aa27.47■■□□□ 1.99
LINC01003-201ENST00000564834 SPA17Q15506 151 aa27.47■■□□□ 1.99
LINC01003-201ENST00000564834 SNRNP35Q16560 246 aaKnown RBP27.47■■□□□ 1.99
LINC01003-201ENST00000564834 SAPCD2Q86UD0 394 aa27.47■■□□□ 1.99
LINC01003-201ENST00000564834 ZSWIM2Q8NEG5 633 aa27.47■■□□□ 1.99
LINC01003-201ENST00000564834 EMID1Q96A84 441 aaPredicted RBP27.47■■□□□ 1.99
LINC01003-201ENST00000564834 FBXL18Q96ME1 805 aa27.47■■□□□ 1.99
LINC01003-201ENST00000564834 SPAG5Q96R06 1193 aa27.47■■□□□ 1.99
LINC01003-201ENST00000564834 DAAM1Q9Y4D1 1078 aa27.47■■□□□ 1.99
LINC01003-201ENST00000564834 SLC15A5A6NIM6 579 aa27.46■■□□□ 1.99
LINC01003-201ENST00000564834 LRRIQ4A6NIV6 560 aa27.46■■□□□ 1.99
LINC01003-201ENST00000564834 IGF2BP3O00425 579 aaKnown RBP eCLIP27.46■■□□□ 1.99
LINC01003-201ENST00000564834 SNAI1O95863 264 aaPredicted RBP27.46■■□□□ 1.99
LINC01003-201ENST00000564834 STRN3Q13033 797 aa27.46■■□□□ 1.99
LINC01003-201ENST00000564834 ASTE1Q2TB18 679 aaPredicted RBP27.46■■□□□ 1.99
LINC01003-201ENST00000564834 TDRD12Q587J7 1177 aaKnown RBP27.46■■□□□ 1.99
LINC01003-201ENST00000564834 KIAA1328Q86T90 577 aa27.46■■□□□ 1.99
LINC01003-201ENST00000564834 POMGNT1Q8WZA1 660 aa27.46■■□□□ 1.99
LINC01003-201ENST00000564834 BICD1Q96G01 975 aa27.46■■□□□ 1.99
LINC01003-201ENST00000564834 IRX2Q9BZI1 471 aaPredicted RBP27.46■■□□□ 1.99
LINC01003-201ENST00000564834 ZBTB42B2RXF5 422 aa27.45■■□□□ 1.99
LINC01003-201ENST00000564834 ADRB2P07550 413 aa27.45■■□□□ 1.99
LINC01003-201ENST00000564834 DLG4P78352 724 aa27.45■■□□□ 1.99
LINC01003-201ENST00000564834 RGMBQ6NW40 437 aa27.45■■□□□ 1.99
LINC01003-201ENST00000564834 SLC5A4Q9NY91 659 aa27.45■■□□□ 1.99
LINC01003-201ENST00000564834 AKR1B10O60218 316 aa27.45■■□□□ 1.98
LINC01003-201ENST00000564834 ASIC2Q16515 512 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms