RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ZNF579Q8NAF0 562 aaKnown RBP20.69■□□□□ 0.9
CLN6-204ENST00000564752 RSPH1Q8WYR4 309 aa20.69■□□□□ 0.9
CLN6-204ENST00000564752 IFT122Q9HBG6 1241 aa20.69■□□□□ 0.9
CLN6-204ENST00000564752 WRAP73Q9P2S5 460 aaPredicted RBP20.69■□□□□ 0.9
CLN6-204ENST00000564752 PIN4Q9Y237 131 aaKnown RBP20.69■□□□□ 0.9
CLN6-204ENST00000564752 PPME1Q9Y570 386 aa20.69■□□□□ 0.9
CLN6-204ENST00000564752 ZNF623O75123 536 aa20.68■□□□□ 0.9
CLN6-204ENST00000564752 BCAR1P56945 870 aa20.68■□□□□ 0.9
CLN6-204ENST00000564752 EPHA7Q15375 998 aa20.68■□□□□ 0.9
CLN6-204ENST00000564752 EARS2Q5JPH6 523 aaKnown RBP20.68■□□□□ 0.9
CLN6-204ENST00000564752 SYCE2Q6PIF2 218 aa20.68■□□□□ 0.9
CLN6-204ENST00000564752 CATSPER4Q7RTX7 472 aa20.68■□□□□ 0.9
CLN6-204ENST00000564752 CCDC83Q8IWF9 413 aa20.68■□□□□ 0.9
CLN6-204ENST00000564752 EXOC8Q8IYI6 725 aa20.68■□□□□ 0.9
CLN6-204ENST00000564752 SLC7A3Q8WY07 619 aa20.68■□□□□ 0.9
CLN6-204ENST00000564752 CEP170P1Q96L14 293 aa20.68■□□□□ 0.9
CLN6-204ENST00000564752 NLRP4Q96MN2 994 aa20.68■□□□□ 0.9
CLN6-204ENST00000564752 DHX33Q9H6R0 707 aaKnown RBP20.68■□□□□ 0.9
CLN6-204ENST00000564752 FAM205CA6NFA0 338 aa20.67■□□□□ 0.9
CLN6-204ENST00000564752 C2orf71A6NGG8 1288 aa20.67■□□□□ 0.9
CLN6-204ENST00000564752 NT5C1B-RDH14C9J2C7 533 aa20.67■□□□□ 0.9
CLN6-204ENST00000564752 MARCH6O60337 910 aa20.67■□□□□ 0.9
CLN6-204ENST00000564752 SMC1AQ14683 1233 aaKnown RBP20.67■□□□□ 0.9
CLN6-204ENST00000564752 LLGL2Q6P1M3 1020 aa20.67■□□□□ 0.9
CLN6-204ENST00000564752 C4orf19Q8IY42 314 aa20.67■□□□□ 0.9
CLN6-204ENST00000564752 PRPF31Q8WWY3 499 aaKnown RBP20.67■□□□□ 0.9
CLN6-204ENST00000564752 LPPQ93052 612 aa20.67■□□□□ 0.9
CLN6-204ENST00000564752 RPGRIP1Q96KN7 1286 aa20.67■□□□□ 0.9
CLN6-204ENST00000564752 KIF2CQ99661 725 aa20.67■□□□□ 0.9
CLN6-204ENST00000564752 FAM105AQ9NUU6 356 aa20.67■□□□□ 0.9
CLN6-204ENST00000564752 COL4A3BPQ9Y5P4 624 aa20.67■□□□□ 0.9
CLN6-204ENST00000564752 HOXB8P17481 243 aaPredicted RBP20.66■□□□□ 0.9
CLN6-204ENST00000564752 RFC5P40937 340 aa20.66■□□□□ 0.9
CLN6-204ENST00000564752 RBM25P49756 843 aaKnown RBP20.66■□□□□ 0.9
CLN6-204ENST00000564752 RAB27AP51159 221 aa20.66■□□□□ 0.9
CLN6-204ENST00000564752 LONRF3Q496Y0 759 aa20.66■□□□□ 0.9
CLN6-204ENST00000564752 POTEDQ86YR6 584 aa20.66■□□□□ 0.9
CLN6-204ENST00000564752 DIS3L2Q8IYB7 885 aaKnown RBP20.66■□□□□ 0.9
CLN6-204ENST00000564752 TNFRSF25Q93038 417 aa20.66■□□□□ 0.9
CLN6-204ENST00000564752 TMEM143Q96AN5 459 aa20.66■□□□□ 0.9
CLN6-204ENST00000564752 ZSCAN31Q96LW9 406 aaPredicted RBP20.66■□□□□ 0.9
CLN6-204ENST00000564752 MFSD14AQ96MC6 490 aa20.66■□□□□ 0.9
CLN6-204ENST00000564752 LXNQ9BS40 222 aa20.66■□□□□ 0.9
CLN6-204ENST00000564752 RGL1Q9NZL6 768 aa20.66■□□□□ 0.9
CLN6-204ENST00000564752 CARNS1A5YM72 827 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 MEIS3P2A8K0S8 358 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 OFD1O75665 1012 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 CXCL14O95715 111 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 YWHABP31946 246 aaKnown RBP20.65■□□□□ 0.9
CLN6-204ENST00000564752 POLGP54098 1239 aaPredicted RBP20.65■□□□□ 0.9
CLN6-204ENST00000564752 ZXDAP98168 799 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 SPIRE1Q08AE8 756 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 NOMO2Q5JPE7 1267 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 GLB1LQ6UWU2 654 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 TRIM67Q6ZTA4 783 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 OTUD6AQ7L8S5 288 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 SRGAP1Q7Z6B7 1085 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 SLFN12Q8IYM2 578 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 PSPC1Q8WXF1 523 aaKnown RBP20.65■□□□□ 0.9
CLN6-204ENST00000564752 CASP10Q92851 521 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 TMEM169Q96HH4 297 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 LLPHQ9BRT6 129 aaKnown RBP20.65■□□□□ 0.9
CLN6-204ENST00000564752 KCNH6Q9H252 994 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 NRDE2Q9H7Z3 1164 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 UPF2Q9HAU5 1272 aaKnown RBP20.65■□□□□ 0.9
CLN6-204ENST00000564752 SH2B1Q9NRF2 756 aaPredicted RBP20.65■□□□□ 0.9
CLN6-204ENST00000564752 AGPAT5Q9NUQ2 364 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 TBC1D13Q9NVG8 400 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 WDFY4Q6ZS81 3184 aa20.65■□□□□ 0.9
CLN6-204ENST00000564752 PIEZO1Q92508 2521 aa20.64■□□□□ 0.9
CLN6-204ENST00000564752 BTBD18B2RXH4 712 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 CLASP2O75122 1294 aaKnown RBP20.64■□□□□ 0.89
CLN6-204ENST00000564752 ZC3H11AO75152 810 aaKnown RBP eCLIP20.64■□□□□ 0.89
CLN6-204ENST00000564752 SRGAP2CP0DJJ0 459 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 HOXA11P31270 313 aaPredicted RBP20.64■□□□□ 0.89
CLN6-204ENST00000564752 LAMTOR4Q0VGL1 99 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 BMS1Q14692 1282 aaKnown RBP20.64■□□□□ 0.89
CLN6-204ENST00000564752 NCAPH2Q6IBW4 605 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 BMP8AQ7Z5Y6 402 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 MRPL10Q7Z7H8 261 aaKnown RBP20.64■□□□□ 0.89
CLN6-204ENST00000564752 TMEM173Q86WV6 379 aaPredicted RBP20.64■□□□□ 0.89
CLN6-204ENST00000564752 PGBD4Q96DM1 585 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 DYDC2Q96IM9 177 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 APOL5Q9BWW9 433 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 ZSWIM4Q9H7M6 989 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 MINDY3Q9H8M7 445 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 PCDHB2Q9Y5E7 798 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 HCFC2Q9Y5Z7 792 aa20.64■□□□□ 0.89
CLN6-204ENST00000564752 TECTAO75443 2155 aa20.63■□□□□ 0.89
CLN6-204ENST00000564752 ZBTB39O15060 712 aa20.63■□□□□ 0.89
CLN6-204ENST00000564752 ASAP2O43150 1006 aa20.63■□□□□ 0.89
CLN6-204ENST00000564752 SLITRK3O94933 977 aa20.63■□□□□ 0.89
CLN6-204ENST00000564752 BAG4O95429 457 aaKnown RBP20.63■□□□□ 0.89
CLN6-204ENST00000564752 GALTP07902 379 aa20.63■□□□□ 0.89
CLN6-204ENST00000564752 CTTNQ14247 550 aaKnown RBP20.63■□□□□ 0.89
CLN6-204ENST00000564752 SAFBQ15424 915 aaKnown RBP eCLIP20.63■□□□□ 0.89
CLN6-204ENST00000564752 DDX53Q86TM3 631 aaKnown RBP20.63■□□□□ 0.89
CLN6-204ENST00000564752 VPS52Q8N1B4 723 aa20.63■□□□□ 0.89
CLN6-204ENST00000564752 IGSF21Q96ID5 467 aa20.63■□□□□ 0.89
CLN6-204ENST00000564752 FBXL18Q96ME1 805 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms