RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 ZEB2O60315 1214 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SLITRK3O94933 977 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NDUFA10O95299 355 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 RSPH10BP0C881 870 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 EPB41P11171 864 aaKnown RBP8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CAPN2P17655 700 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 COL9A1P20849 921 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 UBA1P22314 1058 aaKnown RBP8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NR2F2P24468 414 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 KLK7P49862 253 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CHMP4BP1P59074 171 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 KRT83P78385 493 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CDK17Q00537 523 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 KRT76Q01546 638 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ADAM9Q13443 819 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MEA1Q16626 185 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 FSCN1Q16658 493 aaKnown RBP8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 BRDTQ58F21 947 aaPredicted RBP8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CCDC62Q6P9F0 684 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 KCNV1Q6PIU1 500 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 C1orf186Q6ZWK4 172 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 TRIM59Q8IWR1 403 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CCDC170Q8IYT3 715 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MYCT1Q8N699 235 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PCSK9Q8NBP7 692 aaKnown RBP8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 BANK1Q8NDB2 785 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ACRBPQ8NEB7 543 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MNS1Q8NEH6 495 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 KLHDC9Q8NEP7 349 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PIGOQ8TEQ8 1089 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 GPRASP2Q96D09 838 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 INPP4AQ96PE3 977 aaPredicted RBP8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ZSWIM4Q9H7M6 989 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MMRN2Q9H8L6 949 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MLXIPQ9HAP2 919 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PARVGQ9HBI0 331 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 LZTFL1Q9NQ48 299 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MYO1AQ9UBC5 1043 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 DDX41Q9UJV9 622 aaKnown RBP8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SIK3Q9Y2K2 1263 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 Q9Y3F1 56 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SAMM50Q9Y512 469 aa8.14□□□□□ -1.11
MAP1LC3B-205ENST00000564638 A0A1W2PPC1 479 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 WDR64B1ANS9 1081 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 URI1O94763 535 aaPredicted RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PRPF6O94906 941 aaKnown RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 LYPLA2O95372 231 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NR3C1P04150 777 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 P4HBP07237 508 aaKnown RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ASGR1P07306 291 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 MYBP10242 640 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 GUCY2CP25092 1073 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CST5P28325 142 aaPredicted RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SFNP31947 248 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ICAM3P32942 547 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CPT1AP50416 773 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CASP5P51878 434 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ZNF131P52739 623 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ACLYP53396 1101 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 RBM10P98175 930 aaKnown RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ARHGAP1Q07960 439 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ITGB3BPQ13352 177 aaPredicted RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ALCAMQ13740 583 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NEDD9Q14511 834 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CELF3Q5SZQ8 465 aaKnown RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PDXDC1Q6P996 788 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CXCL17Q6UXB2 119 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CYFIP1Q7L576 1253 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CACNA2D4Q7Z3S7 1137 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 FRMD5Q7Z6J6 570 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 KIAA1328Q86T90 577 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 IFNLR1Q8IU57 520 aaPredicted RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 TXLNBQ8N3L3 684 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 EHBP1Q8NDI1 1231 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 RDM1Q8NG50 284 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 GOLGA5Q8TBA6 731 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 AFG1LQ8WV93 481 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 DPF3Q92784 378 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CDHR1Q96JP9 859 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 SPATA33Q96N06 139 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 WDR24Q96S15 920 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 HTATIP2Q9BUP3 242 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 TIPINQ9BVW5 301 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 LSM14BQ9BX40 385 aaKnown RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 NUCKS1Q9H1E3 243 aaKnown RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 HAUS4Q9H6D7 363 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 BCAS3Q9H6U6 928 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 METTL14Q9HCE5 456 aaKnown RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 STARD7Q9NQZ5 370 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 FAM207AQ9NSI2 230 aaPredicted RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 CEP72Q9P209 647 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ARMCX3Q9UH62 379 aaPredicted RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 DBR1Q9UK59 544 aaKnown RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 ZNF215Q9UL58 517 aaPredicted RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 PHF24Q9UPV7 400 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 EPN1Q9Y6I3 576 aaPredicted RBP8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 XIRP2A4UGR9 3374 aa8.13□□□□□ -1.11
MAP1LC3B-205ENST00000564638 KAT6AQ92794 2004 aa8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 A0A1W2PQ45 241 aaPredicted RBP8.12□□□□□ -1.11
MAP1LC3B-205ENST00000564638 A0A1W2PQY0 241 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms