RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 MSH4O15457 936 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 RAD51CO43502 376 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 RTN2O75298 545 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 FSBPO95073 299 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 P4HBP07237 508 aaKnown RBP8.25□□□□□ -1.09
ATXN3-249ENST00000564606 GLI1P08151 1106 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 PAEPP09466 180 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 MYBL1P10243 752 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 SFNP31947 248 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 SLC16A2P36021 539 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 FNTAP49354 379 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 CARSP49589 748 aaKnown RBP8.25□□□□□ -1.09
ATXN3-249ENST00000564606 SPIRE1Q08AE8 756 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 BFSP1Q12934 665 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 KIF22Q14807 665 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 CEP55Q53EZ4 464 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 ARSHQ5FYA8 562 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 ODR4Q5SWX8 454 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 FKBP1CQ5VVH2 108 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 ICE2Q659A1 982 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 TTBK2Q6IQ55 1244 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 APOBEC3HQ6NTF7 200 aaKnown RBP8.25□□□□□ -1.09
ATXN3-249ENST00000564606 CCDC174Q6PII3 467 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 POTEGQ6S5H5 508 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 POTEEQ6S8J3 1075 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 ZNF720Q7Z2F6 126 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 ZNF571Q7Z3V5 609 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-249ENST00000564606 NT5DC3Q86UY8 548 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 TPH2Q8IWU9 490 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 CACNA2D3Q8IZS8 1091 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 UBLCP1Q8WVY7 318 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-249ENST00000564606 CASKIN2Q8WXE0 1202 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 SLC5A5Q92911 643 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 PGM2Q96G03 612 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 EEF2KMTQ96G04 330 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 PSMB7Q99436 277 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 PSMD1Q99460 953 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 HSD17B14Q9BPX1 270 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 NUDT12Q9BQG2 462 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 ZNF577Q9BSK1 485 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 DEFB129Q9H1M3 183 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 ST6GALNAC4Q9H4F1 302 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 PPCSQ9HAB8 311 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 KIAA1586Q9HCI6 787 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 SAMD15Q9P1V8 674 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 USP20Q9Y2K6 914 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 ZNF536O15090 1300 aa8.25□□□□□ -1.09
ATXN3-249ENST00000564606 LRRC37AA6NMS7 1700 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 E7EVH7 732 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 F8VZ95 297 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 F8W031 263 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-249ENST00000564606 H0YIN7 160 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 MAFGO15525 162 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 THAP12O43422 761 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 NCK2O43639 380 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 PPP1R11O60927 126 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-249ENST00000564606 PHF2O75151 1096 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 ZC3H11AO75152 810 aaKnown RBP eCLIP8.24□□□□□ -1.09
ATXN3-249ENST00000564606 AKAP3O75969 853 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 MTA2O94776 668 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 LYPLA2O95372 231 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 NDUFB10O96000 172 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 AGTP01019 485 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 NUDT17P0C025 328 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 SPATA31C1P0DKV0 1188 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 MYBL2P10244 700 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 GHRP10912 638 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 HOXB1P14653 301 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-249ENST00000564606 SLC9A1P19634 815 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 SLC8A1P32418 973 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 HSD17B3P37058 310 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 SLC1A1P43005 524 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 GUCY2FP51841 1108 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 JAK3P52333 1124 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 GTF2A1P52655 376 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-249ENST00000564606 GALCP54803 685 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 ITGB3BPQ13352 177 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-249ENST00000564606 DRAP1Q14919 205 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-249ENST00000564606 GRIK5Q16478 980 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 PTGISQ16647 500 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 KRT71Q3SY84 523 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 SWT1Q5T5J6 900 aaKnown RBP8.24□□□□□ -1.09
ATXN3-249ENST00000564606 MAMSTRQ6ZN01 415 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 C1orf186Q6ZWK4 172 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 OTUD6AQ7L8S5 288 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 OTOP1Q7RTM1 612 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 CPLX4Q7Z7G2 160 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 NLRP14Q86W24 1093 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 ZNF677Q86XU0 584 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 CCDC24Q8N4L8 307 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 OGFOD1Q8N543 542 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 METTL13Q8N6R0 699 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 XXYLT1Q8NBI6 393 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 GDAP1L1Q96MZ0 367 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 AGPAT1Q99943 283 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 ERP44Q9BS26 406 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 TMEM109Q9BVC6 243 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 INTS2Q9H0H0 1204 aaKnown RBP8.24□□□□□ -1.09
ATXN3-249ENST00000564606 CENPHQ9H3R5 247 aa8.24□□□□□ -1.09
ATXN3-249ENST00000564606 YY1AP1Q9H869 796 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms