RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 IFNLR1Q8IU57 520 aaPredicted RBP20.76■□□□□ 0.91
RAB40C-207ENST00000563109 ELOA2Q8IYF1 753 aaPredicted RBP20.76■□□□□ 0.91
RAB40C-207ENST00000563109 SEPT8Q92599 483 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 IFT122Q9HBG6 1241 aa20.76■□□□□ 0.91
RAB40C-207ENST00000563109 PVALEFA0A1B0GWK0 134 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 GPR182O15218 404 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 SLC16A4O15374 487 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 TRAK2O60296 914 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 ERLIN2O94905 339 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 SMC2O95347 1197 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 CXCL10P02778 98 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 SCP2P22307 547 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 ABCD1P33897 745 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 PCBP1Q15365 356 aaKnown RBP eCLIP20.75■□□□□ 0.91
RAB40C-207ENST00000563109 CATSPER4Q7RTX7 472 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 TMEM40Q8WWA1 233 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 APBB2Q92870 758 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 KIFC3Q9BVG8 833 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 IFIH1Q9BYX4 1025 aaKnown RBP20.75■□□□□ 0.91
RAB40C-207ENST00000563109 IL23AQ9NPF7 189 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 EXOC1Q9NV70 894 aa20.75■□□□□ 0.91
RAB40C-207ENST00000563109 NOC2LQ9Y3T9 749 aaKnown RBP20.75■□□□□ 0.91
RAB40C-207ENST00000563109 MAPTP10636 758 aaKnown RBP20.74■□□□□ 0.91
RAB40C-207ENST00000563109 CD52P31358 61 aa20.74■□□□□ 0.91
RAB40C-207ENST00000563109 NCKAP1LP55160 1127 aa20.74■□□□□ 0.91
RAB40C-207ENST00000563109 MDM2Q00987 491 aaPredicted RBP20.74■□□□□ 0.91
RAB40C-207ENST00000563109 MBTD1Q05BQ5 628 aa20.74■□□□□ 0.91
RAB40C-207ENST00000563109 DPYDQ12882 1025 aa20.74■□□□□ 0.91
RAB40C-207ENST00000563109 PNOCQ13519 176 aa20.74■□□□□ 0.91
RAB40C-207ENST00000563109 MAPK6Q16659 721 aa20.74■□□□□ 0.91
RAB40C-207ENST00000563109 FAM228AQ86W67 206 aa20.74■□□□□ 0.91
RAB40C-207ENST00000563109 MRPL44Q9H9J2 332 aaKnown RBP20.74■□□□□ 0.91
RAB40C-207ENST00000563109 OLFML3Q9NRN5 406 aa20.74■□□□□ 0.91
RAB40C-207ENST00000563109 PRMT7Q9NVM4 692 aaPredicted RBP20.74■□□□□ 0.91
RAB40C-207ENST00000563109 RPN1P04843 607 aaKnown RBP20.73■□□□□ 0.91
RAB40C-207ENST00000563109 ACTN1P12814 892 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 NCBP1Q09161 790 aaKnown RBP20.73■□□□□ 0.91
RAB40C-207ENST00000563109 NFX1Q12986 1120 aaKnown RBP20.73■□□□□ 0.91
RAB40C-207ENST00000563109 STRN3Q13033 797 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 PLEKHG4Q58EX7 1191 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 CNKSR3Q6P9H4 555 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 PSRC1Q6PGN9 363 aaPredicted RBP20.73■□□□□ 0.91
RAB40C-207ENST00000563109 FAM43BQ6ZT52 329 aaPredicted RBP20.73■□□□□ 0.91
RAB40C-207ENST00000563109 STXBP4Q6ZWJ1 553 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 GPT2Q8TD30 523 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 NTPCRQ9BSD7 190 aaKnown RBP20.73■□□□□ 0.91
RAB40C-207ENST00000563109 NUP62CLQ9H1M0 184 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 AGO3Q9H9G7 860 aaKnown RBP20.73■□□□□ 0.91
RAB40C-207ENST00000563109 ERVK-5Q9HDB9 667 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 RMND1Q9NWS8 449 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 ARHGAP28Q9P2N2 729 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 PADI3Q9ULW8 664 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 ADGRA3Q8IWK6 1321 aa20.73■□□□□ 0.91
RAB40C-207ENST00000563109 MKI67P46013 3256 aaKnown RBP20.72■□□□□ 0.91
RAB40C-207ENST00000563109 DENND3A2RUS2 1198 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 H0YGN5 161 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 K7ERI5 159 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 CSDE1O75534 798 aaKnown RBP20.72■□□□□ 0.91
RAB40C-207ENST00000563109 PRKCBP05771 671 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 FGFR4P22455 802 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 MAGEA10P43363 369 aaPredicted RBP20.72■□□□□ 0.91
RAB40C-207ENST00000563109 ALCAMQ13740 583 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 TMEM132AQ24JP5 1023 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 FAM26FQ5R3K3 315 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 HAUS6Q7Z4H7 955 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 TMEM161BQ8NDZ6 487 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 SMARCE1Q969G3 411 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 PRIMPOLQ96LW4 560 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 CLSTN2Q9H4D0 955 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 TMEM134Q9H6X4 195 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 MINDY3Q9H8M7 445 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 TBC1D7Q9P0N9 293 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 PCDH10Q9P2E7 1040 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 ST3GAL5Q9UNP4 418 aa20.72■□□□□ 0.91
RAB40C-207ENST00000563109 KLRC4O43908 158 aa20.71■□□□□ 0.91
RAB40C-207ENST00000563109 GCNT3O95395 438 aa20.71■□□□□ 0.91
RAB40C-207ENST00000563109 NMT1P30419 496 aaKnown RBP20.71■□□□□ 0.91
RAB40C-207ENST00000563109 GPNMBQ14956 572 aa20.71■□□□□ 0.91
RAB40C-207ENST00000563109 KMT5BQ4FZB7 885 aa20.71■□□□□ 0.91
RAB40C-207ENST00000563109 DBF4BQ8NFT6 615 aa20.71■□□□□ 0.91
RAB40C-207ENST00000563109 HVCN1Q96D96 273 aa20.71■□□□□ 0.91
RAB40C-207ENST00000563109 FTHL17Q9BXU8 183 aa20.71■□□□□ 0.91
RAB40C-207ENST00000563109 OSBPL7Q9BZF2 842 aa20.71■□□□□ 0.91
RAB40C-207ENST00000563109 CCDC113Q9H0I3 377 aa20.71■□□□□ 0.91
RAB40C-207ENST00000563109 ACRP10323 421 aa20.7■□□□□ 0.9
RAB40C-207ENST00000563109 AXLP30530 894 aa20.7■□□□□ 0.9
RAB40C-207ENST00000563109 PSMD2Q13200 908 aa20.7■□□□□ 0.9
RAB40C-207ENST00000563109 PRPF4BQ13523 1007 aaKnown RBP20.7■□□□□ 0.9
RAB40C-207ENST00000563109 KCNB1Q14721 858 aa20.7■□□□□ 0.9
RAB40C-207ENST00000563109 CAMK4Q16566 473 aa20.7■□□□□ 0.9
RAB40C-207ENST00000563109 FAM187BQ17R55 369 aa20.7■□□□□ 0.9
RAB40C-207ENST00000563109 PPP4R3CPQ6ZMV5 832 aa20.7■□□□□ 0.9
RAB40C-207ENST00000563109 FZD8Q9H461 694 aa20.7■□□□□ 0.9
RAB40C-207ENST00000563109 ST6GALNAC4Q9H4F1 302 aa20.7■□□□□ 0.9
RAB40C-207ENST00000563109 AGPAT5Q9NUQ2 364 aa20.7■□□□□ 0.9
RAB40C-207ENST00000563109 PIN4Q9Y237 131 aaKnown RBP20.7■□□□□ 0.9
RAB40C-207ENST00000563109 PCDHB13Q9Y5F0 798 aa20.7■□□□□ 0.9
RAB40C-207ENST00000563109 TSPAN1O60635 241 aa20.69■□□□□ 0.9
RAB40C-207ENST00000563109 EFCAB14O75071 495 aa20.69■□□□□ 0.9
RAB40C-207ENST00000563109 ZSCAN20P17040 1043 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms