RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 NIFKQ9BYG3 293 aaKnown RBP10.27□□□□□ -0.77
LINC00838-201ENST00000562956 AIPL1Q9NZN9 384 aa10.27□□□□□ -0.77
LINC00838-201ENST00000562956 AKR1B10O60218 316 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 LCA5LO95447 670 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 SERPING1P05155 500 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 CNGA1P29973 690 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 FKBP1BP68106 108 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 GFPT1Q06210 699 aaPredicted RBP10.26□□□□□ -0.77
LINC00838-201ENST00000562956 SPA17Q15506 151 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 SLC9C1Q4G0N8 1177 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 TDRD12Q587J7 1177 aaKnown RBP10.26□□□□□ -0.77
LINC00838-201ENST00000562956 CELF3Q5SZQ8 465 aaKnown RBP10.26□□□□□ -0.77
LINC00838-201ENST00000562956 SLC39A4Q6P5W5 647 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 ZNF662Q6ZS27 426 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 TAS1R3Q7RTX0 852 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 PLEKHO2Q8TD55 490 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 MORC4Q8TE76 937 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 GPR20Q99678 358 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 DHX33Q9H6R0 707 aaKnown RBP10.26□□□□□ -0.77
LINC00838-201ENST00000562956 PDGFCQ9NRA1 345 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 OGFRQ9NZT2 677 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 EXOC7Q9UPT5 735 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 SLC45A1Q9Y2W3 748 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 LRRC37A2A6NM11 1700 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 MYH11P35749 1972 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 SSU72P8A0A1W2PR75 194 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 GOLGA8IPA6NC78 632 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 GOLGA8JA6NMD2 632 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 VAV2P52735 878 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 SNRPFP62306 86 aaKnown RBP10.26□□□□□ -0.77
LINC00838-201ENST00000562956 ENOX2Q16206 610 aaKnown RBP10.26□□□□□ -0.77
LINC00838-201ENST00000562956 CCDC62Q6P9F0 684 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 TRIM50Q86XT4 487 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 C2orf69Q8N8R5 385 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 AFAP1L1Q8TED9 768 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 GTF3C2Q8WUA4 911 aaPredicted RBP10.26□□□□□ -0.77
LINC00838-201ENST00000562956 COPS5Q92905 334 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 HVCN1Q96D96 273 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 IFT74Q96LB3 600 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
LINC00838-201ENST00000562956 PCDHA13Q9Y5I0 950 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 MRFAP1Q9Y605 127 aa10.26□□□□□ -0.77
LINC00838-201ENST00000562956 KRT13P13646 458 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 ADORA2AP29274 412 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 VAMP7P51809 220 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 TARBP2Q15633 366 aaKnown RBP10.25□□□□□ -0.77
LINC00838-201ENST00000562956 C1orf220Q5T0J3 134 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 FAM160B1Q5W0V3 765 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 SPRYD7Q5W111 196 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 INTS8Q75QN2 995 aaKnown RBP10.25□□□□□ -0.77
LINC00838-201ENST00000562956 ANKRD23Q86SG2 305 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 CBWD2Q8IUF1 395 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 ASAP3Q8TDY4 903 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 SAAL1Q96ER3 474 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 ERO1AQ96HE7 468 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 SPAG5Q96R06 1193 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 PTPN18Q99952 460 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 ARHGAP28Q9P2N2 729 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 MYO1AQ9UBC5 1043 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 FBXL5Q9UKA1 691 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 KRT86O43790 486 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 ADRB2P07550 413 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 MARK3P27448 753 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 JAM2P57087 298 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 CCNA1P78396 465 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 MYL7Q01449 175 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 PPP3CAQ08209 521 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 ASIC2Q16515 512 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 CST9Q5W186 159 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 IQCEQ6IPM2 695 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 KCNV1Q6PIU1 500 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 ARMCX2Q7L311 632 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 IRF2BP2Q7Z5L9 587 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 SLC7A3Q8WY07 619 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 SPATA33Q96N06 139 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 NRBP2Q9NSY0 501 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 USP20Q9Y2K6 914 aa10.25□□□□□ -0.77
LINC00838-201ENST00000562956 CTAGE9A4FU28 777 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 NOP56O00567 594 aaKnown RBP10.24□□□□□ -0.77
LINC00838-201ENST00000562956 PNMA6AP0CW24 399 aaPredicted RBP10.24□□□□□ -0.77
LINC00838-201ENST00000562956 TXNP10599 105 aaKnown RBP10.24□□□□□ -0.77
LINC00838-201ENST00000562956 GLRA2P23416 452 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 ARL2P36404 184 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 KLHL30Q0D2K2 578 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 SNRNP35Q16560 246 aaKnown RBP10.24□□□□□ -0.77
LINC00838-201ENST00000562956 ZNF792Q3KQV3 632 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 DHX37Q8IY37 1157 aaKnown RBP10.24□□□□□ -0.77
LINC00838-201ENST00000562956 GLG1Q92896 1179 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 ZBTB9Q96C00 473 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 INTS2Q9H0H0 1204 aaKnown RBP10.24□□□□□ -0.77
LINC00838-201ENST00000562956 AZI2Q9H6S1 392 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 EMSYQ7Z589 1322 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 MACROD2A1Z1Q3 448 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 ASB14A6NK59 587 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 RBAK-RBAKDNI3L0D1 243 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 MAPK13O15264 365 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 LRRN2O75325 713 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 GCLMP48507 274 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 PTK2Q05397 1052 aa10.24□□□□□ -0.77
LINC00838-201ENST00000562956 KIF5AQ12840 1032 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms