RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 CD2APQ9Y5K6 639 aa5.41□□□□□ -1.54
CASC4-211ENST00000561305 KLRG2A4D1S0 409 aaPredicted RBP5.4□□□□□ -1.54
CASC4-211ENST00000561305 ZNF891A8MT65 544 aaPredicted RBP5.4□□□□□ -1.54
CASC4-211ENST00000561305 ELL2O00472 640 aaPredicted RBP5.4□□□□□ -1.54
CASC4-211ENST00000561305 TGM5O43548 720 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 GAS7O60861 476 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 FSBPO95073 299 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 GAAP10253 952 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 INHBCP55103 352 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 CNGB1Q14028 1251 aaPredicted RBP5.4□□□□□ -1.54
CASC4-211ENST00000561305 SPIDRQ14159 915 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 GPR158Q5T848 1215 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 C1QL3Q5VWW1 255 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 C16orf86Q6ZW13 317 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 LRRTM3Q86VH5 581 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 MDGA1Q8NFP4 955 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 CHTF18Q8WVB6 975 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 NINJ1Q92982 152 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 CLIP3Q96DZ5 547 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 HIST1H2AHQ96KK5 128 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 ZNF512Q96ME7 567 aaPredicted RBP5.4□□□□□ -1.54
CASC4-211ENST00000561305 CEP89Q96ST8 783 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 HIST1H2AJQ99878 128 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 GPR87Q9BY21 358 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 ENKD1Q9H0I2 346 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 SLC2A4RGQ9NR83 387 aa5.4□□□□□ -1.54
CASC4-211ENST00000561305 USP36Q9P275 1121 aaKnown RBP5.4□□□□□ -1.54
CASC4-211ENST00000561305 MYPNQ86TC9 1320 aa5.4□□□□□ -1.55
CASC4-211ENST00000561305 KPNA6O60684 536 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 MFAP3LO75121 409 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 APOL3O95236 402 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 NEK4P51957 841 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 C21orf62-AS1Q17RA5 79 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 TKFCQ3LXA3 575 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 NAIF1Q69YI7 327 aaPredicted RBP5.39□□□□□ -1.55
CASC4-211ENST00000561305 ZNF627Q7L945 461 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 PASD1Q8IV76 773 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 ELOA2Q8IYF1 753 aaPredicted RBP5.39□□□□□ -1.55
CASC4-211ENST00000561305 ULK2Q8IYT8 1036 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 UNC5BQ8IZJ1 945 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 APPBP2Q92624 585 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 UIMC1Q96RL1 719 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 MNTQ99583 582 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 GPRC5BQ9NZH0 403 aa5.39□□□□□ -1.55
CASC4-211ENST00000561305 GOLGA6L6A8MZA4 724 aa5.38□□□□□ -1.55
CASC4-211ENST00000561305 IPO13O94829 963 aaKnown RBP5.38□□□□□ -1.55
CASC4-211ENST00000561305 NPEPPSP55786 919 aa5.38□□□□□ -1.55
CASC4-211ENST00000561305 PCBP1Q15365 356 aaKnown RBP eCLIP5.38□□□□□ -1.55
CASC4-211ENST00000561305 Q6ZPA2 131 aa5.38□□□□□ -1.55
CASC4-211ENST00000561305 SMC1BQ8NDV3 1235 aa5.38□□□□□ -1.55
CASC4-211ENST00000561305 PIK3C3Q8NEB9 887 aa5.38□□□□□ -1.55
CASC4-211ENST00000561305 ARL8AQ96BM9 186 aa5.38□□□□□ -1.55
CASC4-211ENST00000561305 ZNF496Q96IT1 587 aaPredicted RBP5.38□□□□□ -1.55
CASC4-211ENST00000561305 THG1LQ9NWX6 298 aaKnown RBP5.38□□□□□ -1.55
CASC4-211ENST00000561305 NCDNQ9UBB6 729 aa5.38□□□□□ -1.55
CASC4-211ENST00000561305 TRPS1Q9UHF7 1281 aa5.38□□□□□ -1.55
CASC4-211ENST00000561305 REXO2Q9Y3B8 237 aaKnown RBP5.38□□□□□ -1.55
CASC4-211ENST00000561305 A0A087X1B8 175 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 GRXCR1A8MXD5 290 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 STC2O76061 302 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 SEC24DO94855 1032 aaPredicted RBP5.37□□□□□ -1.55
CASC4-211ENST00000561305 PFKMP08237 780 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 KRT4P19013 534 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 PHC1P78364 1004 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 DCAF17Q5H9S7 520 aaPredicted RBP5.37□□□□□ -1.55
CASC4-211ENST00000561305 RABL3Q5HYI8 236 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 ZBTB41Q5SVQ8 909 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 PCSK4Q6UW60 755 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 ESPNLQ6ZVH7 1005 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 APBB1IPQ7Z5R6 666 aaPredicted RBP5.37□□□□□ -1.55
CASC4-211ENST00000561305 ATXN2LQ8WWM7 1075 aaKnown RBP5.37□□□□□ -1.55
CASC4-211ENST00000561305 ST8SIA2Q92186 375 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 PRRX2Q99811 253 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 FANCLQ9NW38 375 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.37□□□□□ -1.55
CASC4-211ENST00000561305 ING3Q9NXR8 418 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 C11orf21Q9P2W6 132 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 PCDHB6Q9Y5E3 794 aa5.37□□□□□ -1.55
CASC4-211ENST00000561305 NRP1O14786 923 aa5.36□□□□□ -1.55
CASC4-211ENST00000561305 PCDH8O95206 1070 aa5.36□□□□□ -1.55
CASC4-211ENST00000561305 KPNA1P52294 538 aaPredicted RBP5.36□□□□□ -1.55
CASC4-211ENST00000561305 INHBEP58166 350 aa5.36□□□□□ -1.55
CASC4-211ENST00000561305 CD69Q07108 199 aa5.36□□□□□ -1.55
CASC4-211ENST00000561305 SMN1Q16637 294 aaKnown RBP5.36□□□□□ -1.55
CASC4-211ENST00000561305 CNNM4Q6P4Q7 775 aa5.36□□□□□ -1.55
CASC4-211ENST00000561305 NIM1KQ8IY84 436 aa5.36□□□□□ -1.55
CASC4-211ENST00000561305 PPM1KQ8N3J5 372 aa5.36□□□□□ -1.55
CASC4-211ENST00000561305 CDYL2Q8N8U2 506 aa5.36□□□□□ -1.55
CASC4-211ENST00000561305 ZNF610Q8N9Z0 462 aa5.36□□□□□ -1.55
CASC4-211ENST00000561305 MSRAQ9UJ68 235 aa5.36□□□□□ -1.55
CASC4-211ENST00000561305 HOXA3O43365 443 aaPredicted RBP5.35□□□□□ -1.55
CASC4-211ENST00000561305 ALDH1A2O94788 518 aa5.35□□□□□ -1.55
CASC4-211ENST00000561305 LY86O95711 162 aa5.35□□□□□ -1.55
CASC4-211ENST00000561305 GNAT2P19087 354 aa5.35□□□□□ -1.55
CASC4-211ENST00000561305 PTGS2P35354 604 aa5.35□□□□□ -1.55
CASC4-211ENST00000561305 GPR15P49685 360 aa5.35□□□□□ -1.55
CASC4-211ENST00000561305 OCRLQ01968 901 aa5.35□□□□□ -1.55
CASC4-211ENST00000561305 SEPT7Q16181 437 aaKnown RBP5.35□□□□□ -1.55
CASC4-211ENST00000561305 CCDC178Q5BJE1 867 aa5.35□□□□□ -1.55
CASC4-211ENST00000561305 METTL24Q5JXM2 366 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms