RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 NSMFQ6X4W1 530 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 CHST15Q7LFX5 561 aaPredicted RBP7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 KIRREL3Q8IZU9 778 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 PPM1NQ8N819 430 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 C8orf58Q8NAV2 365 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 ADCY4Q8NFM4 1077 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 FRS2Q8WU20 508 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 RSRC1Q96IZ7 334 aaKnown RBP7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 NT5C1BQ96P26 610 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 TUBB2BQ9BVA1 445 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 PLEKHA5Q9HAU0 1116 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 NFKBIL1Q9UBC1 381 aaPredicted RBP7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 MAGED2Q9UNF1 606 aaPredicted RBP7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 LRCH1Q9Y2L9 728 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 FCF1Q9Y324 198 aaKnown RBP7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 SNX14Q9Y5W7 946 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 GRIN2DO15399 1336 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 CRB1P82279 1406 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 LRRC37A3O60309 1634 aa7.36□□□□□ -1.23
TSPAN3-209ENST00000560715 ENO4A6NNW6 628 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 CDK2AP1O14519 115 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 GLRX3O76003 335 aaKnown RBP7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 CDKL5O76039 1030 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 GNRH1P01148 92 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 PABPC1P11940 636 aaKnown RBP7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 SLC8A1P32418 973 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 HAUS3Q68CZ6 603 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 REXO1Q8N1G1 1221 aaKnown RBP7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 ANKRD52Q8NB46 1076 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 OR6P1Q8NGX9 317 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 OR2W6PQ8NHA6 318 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 RRP36Q96EU6 259 aaKnown RBP7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 VMP1Q96GC9 406 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 TEKT5Q96M29 485 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 BPIFA3Q9BQP9 254 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 AARSD1Q9BTE6 412 aaKnown RBP7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 CAPS2Q9BXY5 557 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 TBC1D22BQ9NU19 505 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 LMCD1Q9NZU5 365 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 NFAT5O94916 1531 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 KIF1AQ12756 1690 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 ADCY9O60503 1353 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 H7C1W4 665 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 HPDP32754 393 aaPredicted RBP7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 CTNNA1P35221 906 aaKnown RBP7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 TEAD4Q15561 434 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 MTHFSDQ2M296 383 aaKnown RBP7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 RILPL1Q5EBL4 403 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 WDR93Q6P2C0 686 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 MICALCLQ6ZW33 695 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 PDZD4Q76G19 769 aaPredicted RBP7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 BTN2A1Q7KYR7 527 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 LCA5Q86VQ0 697 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 GALNT13Q8IUC8 556 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 DIS3LQ8TF46 1054 aaKnown RBP7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 DIO2Q92813 273 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 OSBP2Q969R2 916 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 LRCH3Q96II8 777 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 TBATAQ96M53 351 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 MMTAG2Q9BU76 263 aaKnown RBP7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 KATNAL1Q9BW62 490 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 SLC40A1Q9NP59 571 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 HPCAL4Q9UM19 191 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 EDARQ9UNE0 448 aa7.35□□□□□ -1.23
TSPAN3-209ENST00000560715 SALL3Q9BXA9 1300 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 POTECB2RU33 542 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 PLOD3O60568 738 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 FESP07332 822 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 TARSP26639 723 aaKnown RBP7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 VEGFBP49765 207 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 SLC27A3Q5K4L6 730 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 FAM228AQ86W67 206 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 RBM12BQ8IXT5 1001 aaKnown RBP7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 CCDC13Q8IYE1 715 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 AHI1Q8N157 1196 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 CARNMT1Q8N4J0 409 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 ATG16L2Q8NAA4 619 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 RBBP8NLQ8NC74 664 aaPredicted RBP7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 CCDC12Q8WUD4 166 aaPredicted RBP7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 ADAM19Q9H013 955 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 GJB4Q9NTQ9 266 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 SAMM50Q9Y512 469 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 PCDHGB5Q9Y5G0 923 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 CACNA1FO60840 1977 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 A0A087WV62 115 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 RASA4BC9J798 803 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 MEN1O00255 615 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 RASA4O43374 803 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 SLITRK5O94991 958 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 HTR3BO95264 441 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 HSPA6P17066 643 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 CD151P48509 253 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 HIRAP54198 1017 aaPredicted RBP7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 GALNT1Q10472 559 aaPredicted RBP7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 ST3GAL1Q11201 340 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 PPP1R26Q5T8A7 1209 aaPredicted RBP7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 HHATQ5VTY9 493 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 CAPRIN2Q6IMN6 1127 aaKnown RBP7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 TMEM139Q8IV31 216 aa7.34□□□□□ -1.23
TSPAN3-209ENST00000560715 STK11IPQ8N1F8 1099 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms