RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 NIFKQ9BYG3 293 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 KATNBL1Q9H079 304 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 ARHGAP20Q9P2F6 1191 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 REXO2Q9Y3B8 237 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 FHOD1Q9Y613 1164 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 EPN1Q9Y6I3 576 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 ZBTB42B2RXF5 422 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 CSDE1O75534 798 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 NDUFA10O95299 355 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 ADRB2P07550 413 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 SMPD1P17405 629 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 YY1P25490 414 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 CYP2C19P33261 490 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 GCLMP48507 274 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 RAPGEF1Q13905 1077 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 TARBP2Q15633 366 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 SEZ6Q53EL9 994 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 MAP4K3Q8IVH8 894 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 METTL13Q8N6R0 699 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 RETREG2Q8NC44 543 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 AFAP1L1Q8TED9 768 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 PRPF31Q8WWY3 499 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 POMGNT1Q8WZA1 660 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 WDR24Q96S15 920 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 TINF2Q9BSI4 451 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 TIPINQ9BVW5 301 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 METTL14Q9HCE5 456 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 KCND1Q9NSA2 647 aa11.88□□□□□ -0.51
SNRPA1-211ENST00000560433 EVPLQ92817 2033 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 HARSP12081 509 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 FECHP22830 423 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 BFSP1Q12934 665 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 CYP4F22Q6NT55 531 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 KCNV1Q6PIU1 500 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 DNAAF5Q86Y56 855 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 XXYLT1Q8NBI6 393 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 NTPCRQ9BSD7 190 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 ZNHIT6Q9NWK9 470 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 PLAGL2Q9UPG8 496 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 PASKQ96RG2 1323 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 A0A1W2PQJ5 194 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 TLR2O60603 784 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 MAPK4P31152 587 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 ARL2P36404 184 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 FMO5P49326 533 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 CLCN3P51790 818 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 GNG11P61952 73 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 PPP3CAQ08209 521 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 CRHR2Q13324 411 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 CAPSQ13938 189 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 MEA1Q16626 185 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 FIGNQ5HY92 759 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 LMBRD2Q68DH5 695 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 DPY19L2P1Q6NXN4 242 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 PDXDC1Q6P996 788 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 RHPN2Q8IUC4 686 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 GANQ9H2C0 597 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 ST6GALNAC4Q9H4F1 302 aa11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 TOPORSQ9NS56 1045 aaPredicted RBP11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 DIS3Q9Y2L1 958 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-211ENST00000560433 EMSYQ7Z589 1322 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 MANSC4A6NHS7 340 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 FAM155AB1AL88 458 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 ZNF263O14978 683 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 LGALS2P05162 132 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 UCHL3P15374 230 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 CTGFP29279 349 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 ACVR2BQ13705 512 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 SNRNP35Q16560 246 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 TDRD12Q587J7 1177 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 CDR2LQ86X02 465 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 DEPTORQ8TB45 409 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 GOLGA5Q8TBA6 731 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 SPIRE2Q8WWL2 714 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 BBXQ8WY36 941 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 FAM213AQ9BRX8 229 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 TARS2Q9BW92 718 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 HAPLN2Q9GZV7 340 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 ARHGAP28Q9P2N2 729 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 ANKFY1Q9P2R3 1169 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 DUSP10Q9Y6W6 482 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 UQCRHLA0A096LP55 91 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 RCCD1A6NED2 376 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 K7ERI5 159 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 MAFO75444 373 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 LGR5O75473 907 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 UQCRHP07919 91 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 SLC10A3P09131 477 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 EIF4A3P38919 411 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 MATR3P43243 847 aaKnown RBP eCLIP11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 ACOT2P49753 483 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 VAMP7P51809 220 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 ALCAMQ13740 583 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 NFIL3Q16649 462 aa11.86□□□□□ -0.51
SNRPA1-211ENST00000560433 ZBTB41Q5SVQ8 909 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms