RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 HOXA11P31270 313 aaPredicted RBP18.62■□□□□ 0.57
RPL28-209ENST00000560055 FAM189BP81408 668 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 PPP2R5AQ15172 486 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 E2F4Q16254 413 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 AMHR2Q16671 573 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 RESP18Q5W5W9 173 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 SLC24A5Q71RS6 500 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 CATSPER4Q7RTX7 472 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 GPBP1Q86WP2 473 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 DRC1Q96MC2 740 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 RAD9AQ99638 391 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 TRAIPQ9BWF2 469 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 SEMA6BQ9H3T3 888 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 C17orf75Q9HAS0 396 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 ADGRA3Q8IWK6 1321 aa18.62■□□□□ 0.57
RPL28-209ENST00000560055 DENND3A2RUS2 1198 aa18.61■□□□□ 0.57
RPL28-209ENST00000560055 INO80B-WBP1J3KQ70 363 aa18.61■□□□□ 0.57
RPL28-209ENST00000560055 MYOGP15173 224 aa18.61■□□□□ 0.57
RPL28-209ENST00000560055 SARSP49591 514 aaKnown RBP18.61■□□□□ 0.57
RPL28-209ENST00000560055 ADALQ6DHV7 355 aa18.61■□□□□ 0.57
RPL28-209ENST00000560055 TIFAQ96CG3 184 aa18.61■□□□□ 0.57
RPL28-209ENST00000560055 IFT74Q96LB3 600 aa18.61■□□□□ 0.57
RPL28-209ENST00000560055 CCDC113Q9H0I3 377 aa18.61■□□□□ 0.57
RPL28-209ENST00000560055 RC3H2Q9HBD1 1191 aaKnown RBP18.61■□□□□ 0.57
RPL28-209ENST00000560055 TSHZ2Q9NRE2 1034 aa18.61■□□□□ 0.57
RPL28-209ENST00000560055 ODF2LQ9ULJ1 636 aa18.61■□□□□ 0.57
RPL28-209ENST00000560055 PIN4Q9Y237 131 aaKnown RBP18.61■□□□□ 0.57
RPL28-209ENST00000560055 RBM19Q9Y4C8 960 aaKnown RBP18.61■□□□□ 0.57
RPL28-209ENST00000560055 UNC80Q8N2C7 3258 aa18.61■□□□□ 0.57
RPL28-209ENST00000560055 GBF1Q92538 1859 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 TMEM265A0A087WTH1 108 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 NPHP3-ACAD11A0A0J9YXS1 232 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 TLL1O43897 1013 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 TSPAN1O60635 241 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 ZSCAN20P17040 1043 aaPredicted RBP18.6■□□□□ 0.57
RPL28-209ENST00000560055 STAT6P42226 847 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 NPTX2P47972 431 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 ZNF131P52739 623 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 RAD51AP2Q09MP3 1159 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 DHX8Q14562 1220 aaKnown RBP18.6■□□□□ 0.57
RPL28-209ENST00000560055 FAM187BQ17R55 369 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 PPP4R3CPQ6ZMV5 832 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 NPAS4Q8IUM7 802 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 PDILTQ8N807 584 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 CDX2Q99626 313 aaPredicted RBP18.6■□□□□ 0.57
RPL28-209ENST00000560055 REEP2Q9BRK0 252 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 KIFC3Q9BVG8 833 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 PANK2Q9BZ23 570 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 C2orf40Q9H1Z8 148 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 FZD8Q9H461 694 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 DACT1Q9NYF0 836 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 MSRAQ9UJ68 235 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 COL4A6Q14031 1691 aa18.6■□□□□ 0.57
RPL28-209ENST00000560055 A0A0U1RQF3 1178 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 LCHNA4D1U4 455 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 SFI1A8K8P3 1242 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 ARHGEF15O94989 841 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 UPP2O95045 317 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 CA3P07451 260 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 PLS3P13797 630 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 CMA1P23946 247 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 PEX3P56589 373 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 CACNB1Q02641 598 aaPredicted RBP18.59■□□□□ 0.57
RPL28-209ENST00000560055 DMP1Q13316 513 aaPredicted RBP18.59■□□□□ 0.57
RPL28-209ENST00000560055 GIT2Q14161 759 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 FAM117BQ6P1L5 589 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 ZBTB8OSQ8IWT0 167 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 DEPTORQ8TB45 409 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 SP7Q8TDD2 431 aaPredicted RBP18.59■□□□□ 0.57
RPL28-209ENST00000560055 SPIRE2Q8WWL2 714 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 PRIMPOLQ96LW4 560 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 NTPCRQ9BSD7 190 aaKnown RBP18.59■□□□□ 0.57
RPL28-209ENST00000560055 ZBED2Q9BTP6 218 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 ELAC1Q9H777 363 aaKnown RBP18.59■□□□□ 0.57
RPL28-209ENST00000560055 GDPD2Q9HCC8 539 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 ARHGAP28Q9P2N2 729 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 INSL6Q9Y581 213 aa18.59■□□□□ 0.57
RPL28-209ENST00000560055 FAM237AA0A1B0GTK4 181 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 DGKIO75912 1065 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 ERLIN2O94905 339 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 AXLP30530 894 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 EFNA5P52803 228 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 SV2BQ7L1I2 683 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 ZNF598Q86UK7 904 aaKnown RBP18.58■□□□□ 0.56
RPL28-209ENST00000560055 ECHDC2Q86YB7 292 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 KCNN1Q92952 543 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 ZNF689Q96CS4 500 aaPredicted RBP18.58■□□□□ 0.56
RPL28-209ENST00000560055 NKX2-4Q9H2Z4 354 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 CUEDC2Q9H467 287 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 PRMT7Q9NVM4 692 aaPredicted RBP18.58■□□□□ 0.56
RPL28-209ENST00000560055 TMEM161AQ9NX61 479 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 FAM13BQ9NYF5 915 aa18.58■□□□□ 0.56
RPL28-209ENST00000560055 PRUNE2Q8WUY3 3088 aa18.57■□□□□ 0.56
RPL28-209ENST00000560055 MYMKA6NI61 221 aa18.57■□□□□ 0.56
RPL28-209ENST00000560055 B4GALT5O43286 388 aa18.57■□□□□ 0.56
RPL28-209ENST00000560055 STAG3L1P0CL83 205 aa18.57■□□□□ 0.56
RPL28-209ENST00000560055 ATF7P17544 494 aaPredicted RBP18.57■□□□□ 0.56
RPL28-209ENST00000560055 ARF4P18085 180 aaPredicted RBP18.57■□□□□ 0.56
RPL28-209ENST00000560055 MAPK6Q16659 721 aa18.57■□□□□ 0.56
RPL28-209ENST00000560055 UBXN11Q5T124 520 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms