RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 C17orf102A2RUQ5 167 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 SRGAP2CP0DJJ0 459 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 FANCCQ00597 558 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 POU5F1BQ06416 359 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 TFDP1Q14186 410 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 HS2ST1Q7LGA3 356 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 RNF149Q8NC42 400 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 GOLGA5Q8TBA6 731 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 ANP32BQ92688 251 aaKnown RBP13.38□□□□□ -0.27
HERC1-205ENST00000559886 CEP63Q96MT8 703 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 TMEM134Q9H6X4 195 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 CGNQ9P2M7 1197 aaKnown RBP13.38□□□□□ -0.27
HERC1-205ENST00000559886 EXOC7Q9UPT5 735 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 SMIM35A0A1B0GVV1 85 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 CABYRO75952 493 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 EFNA5P52803 228 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 ACLYP53396 1101 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 SNRPFP62306 86 aaKnown RBP13.38□□□□□ -0.27
HERC1-205ENST00000559886 SPAG1Q07617 926 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 TCP11X2Q5H9J9 407 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 ARRDC4Q8NCT1 418 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 TMEM174Q8WUU8 243 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 NFKBIZQ9BYH8 718 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 TRIM5Q9C035 493 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 AGPAT3Q9NRZ7 376 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 GTF2IRD1Q9UHL9 959 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 AKT3Q9Y243 479 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 DNAH12Q6ZR08 3092 aa13.38□□□□□ -0.27
HERC1-205ENST00000559886 MOXD2PA6NHM9 499 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 LRRC10BA6NIK2 292 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 KCNJ18B7U540 433 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 K7ERI5 159 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 ADCY5O95622 1261 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 NR3C1P04150 777 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 NR2F2P24468 414 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 EEF1GP26641 437 aaKnown RBP13.37□□□□□ -0.27
HERC1-205ENST00000559886 CTCFP49711 727 aaPredicted RBP13.37□□□□□ -0.27
HERC1-205ENST00000559886 LBX1P52954 281 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 ADAM9Q13443 819 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 KCNJ12Q14500 433 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 MTFR1Q15390 333 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 APTXQ7Z2E3 356 aaKnown RBP13.37□□□□□ -0.27
HERC1-205ENST00000559886 SESTD1Q86VW0 696 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 FAM114A1Q8IWE2 563 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 C2orf40Q9H1Z8 148 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 LIMA1Q9UHB6 759 aaKnown RBP13.37□□□□□ -0.27
HERC1-205ENST00000559886 PHLPP2Q6ZVD8 1323 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 CETN3O15182 167 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 TREHO43280 583 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 SERPINC1P01008 464 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 VTNP04004 478 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 HSPA1AP0DMV8 641 aaKnown RBP13.37□□□□□ -0.27
HERC1-205ENST00000559886 HSPA1BP0DMV9 641 aaKnown RBP13.37□□□□□ -0.27
HERC1-205ENST00000559886 CYP2C9P11712 490 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 RPL13P26373 211 aaKnown RBP13.37□□□□□ -0.27
HERC1-205ENST00000559886 PTENP60484 403 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 ZNF200P98182 395 aaPredicted RBP13.37□□□□□ -0.27
HERC1-205ENST00000559886 FILIP1Q7Z7B0 1213 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 ZBTB8OSQ8IWT0 167 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 C12orf56Q8IXR9 622 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 NLRP4Q96MN2 994 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 CCDC113Q9H0I3 377 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 DMAC2Q9NW81 257 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 IFNKQ9P0W0 207 aa13.37□□□□□ -0.27
HERC1-205ENST00000559886 GRIN2DO15399 1336 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 CLIC2O15247 247 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 CCL5P13501 91 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 ZNF75DP51815 510 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 CDC42EP1Q00587 391 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 STRN3Q13033 797 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 MYBPC2Q14324 1141 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 FBXO46Q6PJ61 603 aaPredicted RBP13.36□□□□□ -0.27
HERC1-205ENST00000559886 RUFY4Q6ZNE9 571 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 IFNLR1Q8IU57 520 aaPredicted RBP13.36□□□□□ -0.27
HERC1-205ENST00000559886 SLC9A9Q8IVB4 645 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 CNOT6LQ96LI5 555 aaKnown RBP13.36□□□□□ -0.27
HERC1-205ENST00000559886 IFT122Q9HBG6 1241 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 MAGEC2Q9UBF1 373 aaPredicted RBP13.36□□□□□ -0.27
HERC1-205ENST00000559886 GNA14O95837 355 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 PIGRP01833 764 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 UBASH3AP57075 661 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 KRT31Q15323 416 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 ANKRD20A12PQ8NF67 263 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 CTAGE1Q96RT6 745 aa13.36□□□□□ -0.27
HERC1-205ENST00000559886 TISP43B9A030 160 aa13.35□□□□□ -0.27
HERC1-205ENST00000559886 ANKRD63C9JTQ0 380 aa13.35□□□□□ -0.27
HERC1-205ENST00000559886 PHKA2P46019 1235 aa13.35□□□□□ -0.27
HERC1-205ENST00000559886 GPC3P51654 580 aa13.35□□□□□ -0.27
HERC1-205ENST00000559886 PKN2Q16513 984 aaKnown RBP13.35□□□□□ -0.27
HERC1-205ENST00000559886 GDF6Q6KF10 455 aaPredicted RBP13.35□□□□□ -0.27
HERC1-205ENST00000559886 SLC39A4Q6P5W5 647 aa13.35□□□□□ -0.27
HERC1-205ENST00000559886 ZNF410Q86VK4 478 aa13.35□□□□□ -0.27
HERC1-205ENST00000559886 MRFAP1L1Q96HT8 127 aa13.35□□□□□ -0.27
HERC1-205ENST00000559886 ZNF668Q96K58 619 aaPredicted RBP13.35□□□□□ -0.27
HERC1-205ENST00000559886 GLT1D1Q96MS3 346 aa13.35□□□□□ -0.27
HERC1-205ENST00000559886 NAP1L5Q96NT1 182 aaPredicted RBP13.35□□□□□ -0.27
HERC1-205ENST00000559886 XPO4Q9C0E2 1151 aaKnown RBP13.35□□□□□ -0.27
HERC1-205ENST00000559886 FAM49AQ9H0Q0 323 aaPredicted RBP13.35□□□□□ -0.27
HERC1-205ENST00000559886 RNF208Q9H0X6 261 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms