RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PEX3P56589 373 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 MBTD1Q05BQ5 628 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 PSMD2Q13200 908 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 KIZQ2M2Z5 673 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 SKOR2Q2VWA4 1001 aaPredicted RBP16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 KMT5BQ4FZB7 885 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 LRRC8DQ7L1W4 858 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 SRGAP1Q7Z6B7 1085 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 USP38Q8NB14 1042 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 RNF149Q8NC42 400 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 SLC17A8Q8NDX2 589 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 HIPK3Q9H422 1215 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 TMEM39AQ9NV64 488 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 HOOK1Q9UJC3 728 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 A0A0C4DFX4 3053 aa16.35■□□□□ 0.21
SNRPA1-207ENST00000559309 EDN1P05305 212 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 KRT18P05783 430 aaKnown RBP16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 HOXD13P35453 343 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 CASP5P51878 434 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 TMEM62Q0P6H9 643 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 STK4Q13043 487 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 DMP1Q13316 513 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 MORC3Q14149 939 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 TFDP1Q14186 410 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 LPIN1Q14693 890 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 BMT2Q1RMZ1 405 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 ODR4Q5SWX8 454 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 MYCT1Q8N699 235 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 KIAA0895Q8NCT3 520 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 GLIS3Q8NEA6 775 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 ERCC4Q92889 916 aaPredicted RBP16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 HVCN1Q96D96 273 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 IFT74Q96LB3 600 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 TET1Q8NFU7 2136 aa16.34■□□□□ 0.21
SNRPA1-207ENST00000559309 NBNO60934 754 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 PIGRP01833 764 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 NMT1P30419 496 aaKnown RBP16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 PHKA2P46019 1235 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 EFNA5P52803 228 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 CAMK4Q16566 473 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 HERC4Q5GLZ8 1057 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 FAM26FQ5R3K3 315 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 CCDC183Q5T5S1 534 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 MFSD5Q6N075 450 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 HAUS6Q7Z4H7 955 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 FAM228AQ86W67 206 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 MAP4K3Q8IVH8 894 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 TRIML1Q8N9V2 468 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 ZNF507Q8TCN5 953 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 HPS3Q969F9 1004 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 PRIMPOLQ96LW4 560 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 OSMRQ99650 979 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 C2orf40Q9H1Z8 148 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 AGO3Q9H9G7 860 aaKnown RBP16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 KMT5AQ9NQR1 393 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 MAN1B1Q9UKM7 699 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 NOC2LQ9Y3T9 749 aaKnown RBP16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 NR2E3Q9Y5X4 410 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 PHLPP2Q6ZVD8 1323 aa16.33■□□□□ 0.2
SNRPA1-207ENST00000559309 H0YCG3 227 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 EIF3DO15371 548 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 SMC2O95347 1197 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 CTSHP09668 335 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 SRGAP2CP0DJJ0 459 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 IDEP14735 1019 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 HOXA11P31270 313 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 CYP2C18P33260 490 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 ABCD1P33897 745 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 RFC2P35250 354 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 SMTNP53814 917 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 ALCAMQ13740 583 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 PLEKHG4Q58EX7 1191 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 TSHZ1Q6ZSZ6 1077 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 FAM178BQ8IXR5 827 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 TMEM174Q8WUU8 243 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 SMARCE1Q969G3 411 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 NLRP4Q96MN2 994 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 KIFC3Q9BVG8 833 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 GCOM2Q9BZD3 368 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 ERVK-5Q9HDB9 667 aa16.32■□□□□ 0.2
SNRPA1-207ENST00000559309 ZMYM2Q9UBW7 1377 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 UBE4BO95155 1302 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 LRRIQ4A6NIV6 560 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 ACKR2O00590 384 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 ABLIM1O14639 778 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 SLC16A4O15374 487 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 DSC3Q14574 896 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 ZNF658Q5TYW1 1059 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 SCFD1Q8WVM8 642 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 NLRP7Q8WX94 980 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 ZNF668Q96K58 619 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 TRAIPQ9BWF2 469 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 GTPBP4Q9BZE4 634 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 INO80BQ9C086 356 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 PTPRHQ9HD43 1115 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 RMND1Q9NWS8 449 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 TBX20Q9UMR3 447 aa16.31■□□□□ 0.2
SNRPA1-207ENST00000559309 CNTNAP2Q9UHC6 1331 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 A0A1W2PPC1 479 aa16.3■□□□□ 0.2
SNRPA1-207ENST00000559309 DENND3A2RUS2 1198 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms