RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 MAMDC4Q6UXC1 1216 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 Q6ZSN1 163 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 HDGFL2Q7Z4V5 671 aaPredicted RBP5.18□□□□□ -1.58
VPS13C-207ENST00000558919 ADGRE4PQ86SQ3 457 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 UNC5BQ8IZJ1 945 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 ANKRD53Q8N9V6 530 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 GAB3Q8WWW8 586 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 ACAP3Q96P50 834 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 UIMC1Q96RL1 719 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 GPHA2Q96T91 129 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 ANO3Q9BYT9 981 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 AGO3Q9H9G7 860 aaKnown RBP5.18□□□□□ -1.58
VPS13C-207ENST00000558919 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS13C-207ENST00000558919 PLA2G3Q9NZ20 509 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 USP18Q9UMW8 372 aa5.18□□□□□ -1.58
VPS13C-207ENST00000558919 A0A1W2PRX2 142 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 GOLGA8BA8MQT2 603 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 TOX4O94842 621 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 GAAP10253 952 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 NRG3P56975 720 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 FOXL1Q12952 345 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 SAFB2Q14151 953 aaKnown RBP eCLIP5.17□□□□□ -1.58
VPS13C-207ENST00000558919 PDCD1Q15116 288 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 CDSNQ15517 529 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 ZXDCQ2QGD7 858 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-207ENST00000558919 KRT40Q6A162 431 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 SLC41A1Q8IVJ1 513 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 FAM89AQ96GI7 184 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 RPL10LQ96L21 214 aaKnown RBP5.17□□□□□ -1.58
VPS13C-207ENST00000558919 MPHOSPH9Q99550 1183 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 SPC25Q9HBM1 224 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 TOPORSQ9NS56 1045 aaPredicted RBP5.17□□□□□ -1.58
VPS13C-207ENST00000558919 PRSS50Q9UI38 385 aa5.17□□□□□ -1.58
VPS13C-207ENST00000558919 GPR39O43194 453 aa5.16□□□□□ -1.58
VPS13C-207ENST00000558919 CLEC2LP0C7M8 214 aa5.16□□□□□ -1.58
VPS13C-207ENST00000558919 ACO1P21399 889 aaKnown RBP5.16□□□□□ -1.58
VPS13C-207ENST00000558919 MSX2P35548 267 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-207ENST00000558919 CD69Q07108 199 aa5.16□□□□□ -1.58
VPS13C-207ENST00000558919 ACAP1Q15027 740 aa5.16□□□□□ -1.58
VPS13C-207ENST00000558919 PRKD1Q15139 912 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-207ENST00000558919 FSCN1Q16658 493 aaKnown RBP5.16□□□□□ -1.58
VPS13C-207ENST00000558919 RNF219Q5W0B1 726 aaPredicted RBP5.16□□□□□ -1.58
VPS13C-207ENST00000558919 IQSEC1Q6DN90 963 aa5.16□□□□□ -1.58
VPS13C-207ENST00000558919 CCDC62Q6P9F0 684 aa5.16□□□□□ -1.58
VPS13C-207ENST00000558919 LYSMD2Q8IV50 215 aa5.16□□□□□ -1.58
VPS13C-207ENST00000558919 OR14C36Q8NHC7 312 aa5.16□□□□□ -1.58
VPS13C-207ENST00000558919 ADOQ96SZ5 270 aa5.16□□□□□ -1.58
VPS13C-207ENST00000558919 SBNO2Q9Y2G9 1366 aa5.16□□□□□ -1.58
VPS13C-207ENST00000558919 DNAJC6O75061 913 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 LY86O95711 162 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 INSRRP14616 1297 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 POU3F3P20264 500 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-207ENST00000558919 TMPRSS15P98073 1019 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 HHEXQ03014 270 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 PPARAQ07869 468 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 TRIM25Q14258 630 aaKnown RBP5.15□□□□□ -1.59
VPS13C-207ENST00000558919 UGT8Q16880 541 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 CT83Q5H943 113 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 PITRM1Q5JRX3 1037 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 RNF187Q5TA31 235 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-207ENST00000558919 LMBR1LQ6UX01 489 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 GAREM2Q75VX8 874 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 TAS1R1Q7RTX1 841 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 SPATS2Q86XZ4 545 aaKnown RBP5.15□□□□□ -1.59
VPS13C-207ENST00000558919 GLB1L2Q8IW92 636 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 PALM2Q8IXS6 379 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 CMTM4Q8IZR5 234 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 D2HGDHQ8N465 521 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 PIK3C3Q8NEB9 887 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 WDR66Q8TBY9 1149 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 TCF25Q9BQ70 676 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 FDXACB1Q9BRP7 624 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-207ENST00000558919 IL23AQ9NPF7 189 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 RCAN3Q9UKA8 241 aa5.15□□□□□ -1.59
VPS13C-207ENST00000558919 A0A1W2PR48 441 aa5.14□□□□□ -1.59
VPS13C-207ENST00000558919 UBE2QL1A1L167 161 aa5.14□□□□□ -1.59
VPS13C-207ENST00000558919 NRP1O14786 923 aa5.14□□□□□ -1.59
VPS13C-207ENST00000558919 ENPP1P22413 925 aa5.14□□□□□ -1.59
VPS13C-207ENST00000558919 MEF2AQ02078 507 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-207ENST00000558919 FAM111BQ6SJ93 734 aa5.14□□□□□ -1.59
VPS13C-207ENST00000558919 LMBR1Q8WVP7 490 aa5.14□□□□□ -1.59
VPS13C-207ENST00000558919 EAF2Q96CJ1 260 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-207ENST00000558919 TMEM176AQ96HP8 235 aa5.14□□□□□ -1.59
VPS13C-207ENST00000558919 RAX2Q96IS3 184 aa5.14□□□□□ -1.59
VPS13C-207ENST00000558919 PAWRQ96IZ0 340 aaKnown RBP5.14□□□□□ -1.59
VPS13C-207ENST00000558919 KCTD10Q9H3F6 313 aa5.14□□□□□ -1.59
VPS13C-207ENST00000558919 EVLQ9UI08 416 aaPredicted RBP5.14□□□□□ -1.59
VPS13C-207ENST00000558919 MCM8Q9UJA3 840 aa5.14□□□□□ -1.59
VPS13C-207ENST00000558919 CDY2AQ9Y6F7 541 aa5.14□□□□□ -1.59
VPS13C-207ENST00000558919 GOLGA8AA7E2F4 631 aa5.13□□□□□ -1.59
VPS13C-207ENST00000558919 CYP27B1O15528 508 aa5.13□□□□□ -1.59
VPS13C-207ENST00000558919 ALDH1A2O94788 518 aa5.13□□□□□ -1.59
VPS13C-207ENST00000558919 LPLP06858 475 aa5.13□□□□□ -1.59
VPS13C-207ENST00000558919 LGALS4P56470 323 aa5.13□□□□□ -1.59
VPS13C-207ENST00000558919 WNT3AP56704 352 aa5.13□□□□□ -1.59
VPS13C-207ENST00000558919 MRPS9P82933 396 aaKnown RBP5.13□□□□□ -1.59
VPS13C-207ENST00000558919 MGAT5Q09328 741 aa5.13□□□□□ -1.59
VPS13C-207ENST00000558919 SPIDRQ14159 915 aa5.13□□□□□ -1.59
VPS13C-207ENST00000558919 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS13C-207ENST00000558919 LHFPL2Q6ZUX7 228 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms