RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 EFEMP2O95967 443 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 CYP2D6P10635 497 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 MAP2K2P36507 400 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 ECI1P42126 302 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 TM4SF4P48230 202 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 SEPHS1P49903 392 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 SSRP1Q08945 709 aaKnown RBP5.14□□□□□ -1.59
SPG11-211ENST00000558561 SCRN1Q12765 414 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 DUSP4Q13115 394 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 VGLL4Q14135 290 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 TIGD5Q53EQ6 642 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 CCDC158Q5M9N0 1113 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 YOD1Q5VVQ6 348 aaPredicted RBP5.14□□□□□ -1.59
SPG11-211ENST00000558561 RCSD1Q6JBY9 416 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 APOBEC3FQ8IUX4 373 aaKnown RBP5.14□□□□□ -1.59
SPG11-211ENST00000558561 MAPKAPK5Q8IW41 473 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 CRACR2BQ8N4Y2 399 aaPredicted RBP5.14□□□□□ -1.59
SPG11-211ENST00000558561 MAGEB6Q8N7X4 407 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 NAT16Q8N8M0 369 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 PDZD8Q8NEN9 1154 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.14□□□□□ -1.59
SPG11-211ENST00000558561 FAM151AQ8WW52 585 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 CCDC120Q96HB5 630 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 SGSM3Q96HU1 749 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 WNK4Q96J92 1243 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 FCRL2Q96LA5 508 aaPredicted RBP5.14□□□□□ -1.59
SPG11-211ENST00000558561 PTCHD1Q96NR3 888 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 SEC62Q99442 399 aaKnown RBP5.14□□□□□ -1.59
SPG11-211ENST00000558561 SPATA9Q9BWV2 254 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 CYP26B1Q9NR63 512 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 SAP30BPQ9UHR5 308 aaKnown RBP5.14□□□□□ -1.59
SPG11-211ENST00000558561 PALD1Q9ULE6 856 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 BACE2Q9Y5Z0 518 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 MROH7-TTC4A0A0A0MT08 1334 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 GAKO14976 1311 aa5.14□□□□□ -1.59
SPG11-211ENST00000558561 OTOFQ9HC10 1997 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 DOCK3Q8IZD9 2030 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 TCRBV5S4A2TA0A5A2 114 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 MYO1BO43795 1136 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 ADCY3O60266 1144 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 HPXP02790 462 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 UQCRFS1P1P0C7P4 283 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 ENDOUP21128 410 aaKnown RBP5.13□□□□□ -1.59
SPG11-211ENST00000558561 ECE1P42892 770 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 GALK1P51570 392 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 IRAK1P51617 712 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 IFRD2Q12894 506 aaPredicted RBP5.13□□□□□ -1.59
SPG11-211ENST00000558561 MOGSQ13724 837 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 HSP90AA2PQ14568 343 aaPredicted RBP5.13□□□□□ -1.59
SPG11-211ENST00000558561 PRSS53Q2L4Q9 553 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 SUPT20HL1Q3ZLR7 823 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 ANKRD45Q5TZF3 282 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 EEF1DP3Q658K8 133 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 NAA16Q6N069 864 aaPredicted RBP5.13□□□□□ -1.59
SPG11-211ENST00000558561 CEP128Q6ZU80 1094 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 ARMC9Q7Z3E5 817 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 ATG4DQ86TL0 474 aaPredicted RBP5.13□□□□□ -1.59
SPG11-211ENST00000558561 FAM83AQ86UY5 434 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 DZIP1Q86YF9 867 aaKnown RBP5.13□□□□□ -1.59
SPG11-211ENST00000558561 FAM43AQ8N2R8 423 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 LILRB2Q8N423 598 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 OXR1Q8N573 874 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 BRI3BPQ8WY22 251 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 MYLIPQ8WY64 445 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 COPS5Q92905 334 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 ZNF669Q96BR6 464 aaPredicted RBP5.13□□□□□ -1.59
SPG11-211ENST00000558561 OPTNQ96CV9 577 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 KIF1BPQ96EK5 621 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 IDI2Q9BXS1 227 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 DNAJC18Q9H819 358 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 INCENPQ9NQS7 918 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 ARHGEF4Q9NR80 690 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 TNFRSF10DQ9UBN6 386 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 ZNF112Q9UJU3 913 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 ZSWIM8A7E2V4 1837 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 SIPA1L1O43166 1804 aa5.13□□□□□ -1.59
SPG11-211ENST00000558561 FITM1A5D6W6 292 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 ARNTLO00327 626 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 PRODHO43272 600 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 PSPNO60542 156 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 RAB11FIP3O75154 756 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 PAPLNO95428 1278 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 THBDP07204 575 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 SNRPB2P08579 225 aaKnown RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 IFIT2P09913 472 aaKnown RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 FAM153BP0C7A2 387 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 PLS3P13797 630 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 PDE6AP16499 860 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 ATP5JP18859 108 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 CTGFP29279 349 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 HOXC12P31275 282 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 KIR2DL1P43626 348 aaPredicted RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 KIR2DL2P43627 348 aaPredicted RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 AFMP43652 599 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 KCNJ6P48051 423 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 CTCFP49711 727 aaPredicted RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 MMP14P50281 582 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 PLCD1P51178 756 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 RTP1P59025 263 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 MAP2K1Q02750 393 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms