RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 RAD9AQ99638 391 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 TIPINQ9BVW5 301 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 SCAND2PQ9GZW5 306 aaPredicted RBP13.82□□□□□ -0.2
LRRC28-206ENST00000558471 NKX2-4Q9H2Z4 354 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 GDPD2Q9HCC8 539 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 CHST12Q9NRB3 414 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 TSHZ2Q9NRE2 1034 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 C1orf112Q9NSG2 853 aa13.82□□□□□ -0.2
LRRC28-206ENST00000558471 CIZ1Q9ULV3 898 aaPredicted RBP13.82□□□□□ -0.2
LRRC28-206ENST00000558471 MYO9BQ13459 2157 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 LCHNA4D1U4 455 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 IBSPP21815 317 aaPredicted RBP13.81□□□□□ -0.2
LRRC28-206ENST00000558471 HOXA11P31270 313 aaPredicted RBP13.81□□□□□ -0.2
LRRC28-206ENST00000558471 STAT6P42226 847 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 SARSP49591 514 aaKnown RBP13.81□□□□□ -0.2
LRRC28-206ENST00000558471 PEX3P56589 373 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 HTRA4P83105 476 aaPredicted RBP13.81□□□□□ -0.2
LRRC28-206ENST00000558471 GIT2Q14161 759 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 RESP18Q5W5W9 173 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 CDCA2Q69YH5 1023 aaPredicted RBP13.81□□□□□ -0.2
LRRC28-206ENST00000558471 ADALQ6DHV7 355 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 GPR153Q6NV75 609 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 REEP2Q9BRK0 252 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 KIFC3Q9BVG8 833 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 C17orf75Q9HAS0 396 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 AGPAT5Q9NUQ2 364 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 PIN4Q9Y237 131 aaKnown RBP13.81□□□□□ -0.2
LRRC28-206ENST00000558471 INSL6Q9Y581 213 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 ADGRA3Q8IWK6 1321 aa13.81□□□□□ -0.2
LRRC28-206ENST00000558471 FNDC1Q4ZHG4 1894 aaPredicted RBP13.8□□□□□ -0.2
LRRC28-206ENST00000558471 MYMKA6NI61 221 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 CCDC169A6NNP5 214 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 TSPAN1O60635 241 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 DGKIO75912 1065 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 ERLIN2O94905 339 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 ARHGEF15O94989 841 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 CA3P07451 260 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 NPTX2P47972 431 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 PCBP1Q15365 356 aaKnown RBP eCLIP13.8□□□□□ -0.2
LRRC28-206ENST00000558471 E2F4Q16254 413 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 AMHR2Q16671 573 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 SV2BQ7L1I2 683 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 NPAS4Q8IUM7 802 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 ZBTB8OSQ8IWT0 167 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 DEPTORQ8TB45 409 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 NTPCRQ9BSD7 190 aaKnown RBP13.8□□□□□ -0.2
LRRC28-206ENST00000558471 C2orf40Q9H1Z8 148 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 TTYH1Q9H313 450 aaPredicted RBP13.8□□□□□ -0.2
LRRC28-206ENST00000558471 FZD8Q9H461 694 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 DACT1Q9NYF0 836 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 FAM13BQ9NYF5 915 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 ODF2LQ9ULJ1 636 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 PCDHB7Q9Y5E2 793 aa13.8□□□□□ -0.2
LRRC28-206ENST00000558471 A0A0U1RQF3 1178 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 POLR2DO15514 142 aaKnown RBP13.79□□□□□ -0.2
LRRC28-206ENST00000558471 B4GALT5O43286 388 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 KRT18P05783 430 aaKnown RBP13.79□□□□□ -0.2
LRRC28-206ENST00000558471 STAG3L1P0CL83 205 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 PLS3P13797 630 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 ARF4P18085 180 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-206ENST00000558471 CMA1P23946 247 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 AXLP30530 894 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 DMP1Q13316 513 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-206ENST00000558471 FAM187BQ17R55 369 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 TWF2Q6IBS0 349 aaKnown RBP13.79□□□□□ -0.2
LRRC28-206ENST00000558471 Q7L0L9 218 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 DYMQ7RTS9 669 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 ECHDC2Q86YB7 292 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 IQUBQ8NA54 791 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 STAMQ92783 540 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 DHX58Q96C10 678 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 ZNF689Q96CS4 500 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-206ENST00000558471 CPB2Q96IY4 423 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 TRAIPQ9BWF2 469 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 CCDC113Q9H0I3 377 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 SEMA6BQ9H3T3 888 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 ZNF576Q9H609 170 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 ELAC1Q9H777 363 aaKnown RBP13.79□□□□□ -0.2
LRRC28-206ENST00000558471 SLC28A3Q9HAS3 691 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 RC3H2Q9HBD1 1191 aaKnown RBP13.79□□□□□ -0.2
LRRC28-206ENST00000558471 KMT5AQ9NQR1 393 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 PRMT7Q9NVM4 692 aaPredicted RBP13.79□□□□□ -0.2
LRRC28-206ENST00000558471 TMEM161AQ9NX61 479 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 LRFN2Q9ULH4 789 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 USP20Q9Y2K6 914 aa13.79□□□□□ -0.2
LRRC28-206ENST00000558471 A0A1B0GVL5 298 aa13.78□□□□□ -0.2
LRRC28-206ENST00000558471 TTLL13PA6NNM8 815 aa13.78□□□□□ -0.2
LRRC28-206ENST00000558471 K7ERI5 159 aa13.78□□□□□ -0.2
LRRC28-206ENST00000558471 SLC16A4O15374 487 aa13.78□□□□□ -0.2
LRRC28-206ENST00000558471 EDN1P05305 212 aa13.78□□□□□ -0.2
LRRC28-206ENST00000558471 LIG1P18858 919 aa13.78□□□□□ -0.2
LRRC28-206ENST00000558471 GATMP50440 423 aa13.78□□□□□ -0.2
LRRC28-206ENST00000558471 ZNF131P52739 623 aa13.78□□□□□ -0.2
LRRC28-206ENST00000558471 EFNA5P52803 228 aa13.78□□□□□ -0.2
LRRC28-206ENST00000558471 TAP1Q03518 808 aa13.78□□□□□ -0.2
LRRC28-206ENST00000558471 NCBP1Q09161 790 aaKnown RBP13.78□□□□□ -0.2
LRRC28-206ENST00000558471 MAPK6Q16659 721 aa13.78□□□□□ -0.2
LRRC28-206ENST00000558471 TPRNQ4KMQ1 711 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms