RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 MLH1P40692 756 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 MXI1P50539 228 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 ADARP55265 1226 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 NLRP11P59045 1033 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 SP4Q02446 784 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 TBL3Q12788 808 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 DMP1Q13316 513 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 MTF1Q14872 753 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 LRRC41Q15345 812 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 PATL1Q86TB9 770 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 CATSPER3Q86XQ3 398 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 MLH3Q9UHC1 1453 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 TMEM120BA0PK00 339 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 GOLGA8IPA6NC78 632 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 ASAP2O43150 1006 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 TBC1D4O60343 1298 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 TTLL1O95922 423 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 PRAMEP78395 509 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 IRX2Q9BZI1 471 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 NPHS2Q9NP85 383 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 CYP26B1Q9NR63 512 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 SAP30BPQ9UHR5 308 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 PDHBP11177 359 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 ZBTB41Q5SVQ8 909 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 NOA1Q8NC60 698 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 ZKSCAN4Q969J2 545 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 PPP2R3CQ969Q6 453 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 BSDC1Q9NW68 430 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 MAST3O60307 1309 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 NEURL1BA8MQ27 555 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 XPO1O14980 1071 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 RPS6KA5O75582 802 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 SEC24DO94855 1032 aaPredicted RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 PLCG1P19174 1290 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 EIF2B2P49770 351 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 DMPKQ09013 629 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 KCNB1Q14721 858 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 TAF12Q16514 161 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 ZC3H12BQ5HYM0 836 aaKnown RBP12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 FAM102BQ5T8I3 360 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 CALN1Q9BXU9 219 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 KIF17Q9P2E2 1029 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 CCPG1Q9ULG6 757 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 PCDH11XQ9BZA7 1347 aa12.49□□□□□ -0.41
CSPG4P12-201ENST00000558282 PIK3R2O00459 728 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 ORC4O43929 436 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 ATP6V1B1P15313 513 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 CDC27P30260 824 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 IFNA8P32881 189 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 DYNLT1P63172 113 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 BTKQ06187 659 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 ZNF790Q6PG37 636 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 TC2NQ8N9U0 490 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 TLR7Q9NYK1 1049 aaKnown RBP12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 GGA2Q9UJY4 613 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 GDAQ9Y2T3 454 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 DLGAP3O95886 979 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 TMEM191BP0C7N4 346 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 SMARCA1P28370 1054 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 TRADDQ15628 312 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 IZUMO3Q5VZ72 239 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 TTC33Q6PID6 262 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 FLCNQ8NFG4 579 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 TEKT3Q9BXF9 490 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 WDR19Q8NEZ3 1342 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 SYNMO15061 1565 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 IQGAP3Q86VI3 1631 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 GOLGA8MH3BSY2 632 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 ALDH18A1P54886 795 aaKnown RBP12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 PDIA2Q13087 525 aaKnown RBP12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 NR5A1Q13285 461 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 CEP78Q5JTW2 689 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 LRRC34Q8IZ02 419 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 CALML6Q8TD86 181 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 JADE3Q92613 823 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 SERPINB12Q96P63 405 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 SRRM3A6NNA2 597 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 H3BQF6 201 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 SKAP2O75563 359 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 FAM47AQ5JRC9 791 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 SYCP2LQ5T4T6 812 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 TPTE2Q6XPS3 522 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 HDDC2Q7Z4H3 204 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 PRUNE1Q86TP1 453 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 ZNF589Q86UQ0 364 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 ZBTB8OSQ8IWT0 167 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 PPM1NQ8N819 430 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 ATL2Q8NHH9 583 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 ZNF594Q96JF6 807 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 COG4Q9H9E3 785 aa12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 PSMC3IPQ9P2W1 217 aaPredicted RBP12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 EDC4Q6P2E9 1401 aaKnown RBP12.48□□□□□ -0.41
CSPG4P12-201ENST00000558282 KDM5CP41229 1560 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 CROCC2H7BZ55 1655 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 FAM170AA1A519 330 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 USP17L12C9JPN9 530 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 USP17L21D6R901 530 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 PRPSAP2O60256 369 aa12.47□□□□□ -0.41
CSPG4P12-201ENST00000558282 ATP9AO75110 1047 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms