RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 ZNF746Q6NUN9 644 aaPredicted RBP9.05□□□□□ -0.96
SPG11-209ENST00000558253 OTUD6AQ7L8S5 288 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 SLFN11Q7Z7L1 901 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 NLRX1Q86UT6 975 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 PIGOQ8TEQ8 1089 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 CCDC43Q96MW1 224 aaKnown RBP9.05□□□□□ -0.96
SPG11-209ENST00000558253 FIZ1Q96SL8 496 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 NAP1L3Q99457 506 aaPredicted RBP9.05□□□□□ -0.96
SPG11-209ENST00000558253 LXNQ9BS40 222 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 ZNF341Q9BYN7 854 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 TMEM39BQ9GZU3 492 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 SIX2Q9NPC8 291 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 KCNH7Q9NS40 1196 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.05□□□□□ -0.96
SPG11-209ENST00000558253 STIM2Q9P246 746 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 SUCLA2Q9P2R7 463 aaPredicted RBP9.05□□□□□ -0.96
SPG11-209ENST00000558253 PPP1R9AQ9ULJ8 1098 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 TTC7AQ9ULT0 858 aaPredicted RBP9.05□□□□□ -0.96
SPG11-209ENST00000558253 PFASO15067 1338 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 LTBP3Q9NS15 1303 aa9.05□□□□□ -0.96
SPG11-209ENST00000558253 WDR64B1ANS9 1081 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 RSPH10B2B2RC85 870 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 GOLGA8KD6RF30 607 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 PDE2AO00408 941 aaPredicted RBP9.04□□□□□ -0.96
SPG11-209ENST00000558253 KIAA0391O15091 583 aaKnown RBP9.04□□□□□ -0.96
SPG11-209ENST00000558253 NKRFO15226 690 aaKnown RBP eCLIP9.04□□□□□ -0.96
SPG11-209ENST00000558253 POLR3GO15318 223 aaPredicted RBP9.04□□□□□ -0.96
SPG11-209ENST00000558253 DHX15O43143 795 aaKnown RBP9.04□□□□□ -0.96
SPG11-209ENST00000558253 CHMP2AO43633 222 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 EXOC3O60645 756 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 HIP1RO75146 1068 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 TMEM253P0C7T8 217 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 RSPH10BP0C881 870 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 HADHBP55084 474 aaKnown RBP9.04□□□□□ -0.96
SPG11-209ENST00000558253 GTF2BQ00403 316 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 BFSP1Q12934 665 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 PAK2Q13177 524 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 C8orf74Q6P047 294 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 ZNF571Q7Z3V5 609 aaPredicted RBP9.04□□□□□ -0.96
SPG11-209ENST00000558253 C1orf131Q8NDD1 294 aaKnown RBP9.04□□□□□ -0.96
SPG11-209ENST00000558253 SLC30A5Q8TAD4 765 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 SYTL5Q8TDW5 730 aaPredicted RBP9.04□□□□□ -0.96
SPG11-209ENST00000558253 MORC4Q8TE76 937 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 WHAMMQ8TF30 809 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 AENQ8WTP8 325 aaKnown RBP9.04□□□□□ -0.96
SPG11-209ENST00000558253 SPIRE2Q8WWL2 714 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 KIFAP3Q92845 792 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 KCNN1Q92952 543 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 GPRASP2Q96D09 838 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 C12orf42Q96LP6 360 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 PHOX2BQ99453 314 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 TAOK3Q9H2K8 898 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 PDE11AQ9HCR9 933 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 WBP1LQ9NX94 342 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 CWC15Q9P013 229 aaKnown RBP9.04□□□□□ -0.96
SPG11-209ENST00000558253 APEX2Q9UBZ4 518 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 ADAM21Q9UKJ8 722 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 PPP2R3BQ9Y5P8 575 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 MYPNQ86TC9 1320 aa9.04□□□□□ -0.96
SPG11-209ENST00000558253 LOXHD1Q8IVV2 1947 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 ZMYM2Q9UBW7 1377 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 F8VZ95 297 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 ATP2A1O14983 1001 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 ZNF185O15231 689 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 CLIC2O15247 247 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 RPS6KA5O75582 802 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 KIF4AO95239 1232 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 IVLP07476 585 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 HSPA6P17066 643 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 TNFAIP3P21580 790 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 KLRC1P26715 233 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 CCND2P30279 289 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 NMT1P30419 496 aaKnown RBP9.03□□□□□ -0.96
SPG11-209ENST00000558253 INPP5BP32019 993 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 TNNT3P45378 269 aaPredicted RBP9.03□□□□□ -0.96
SPG11-209ENST00000558253 NOP2P46087 812 aaKnown RBP9.03□□□□□ -0.96
SPG11-209ENST00000558253 RARRES1P49788 294 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 MYL7Q01449 175 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 PPFIA1Q13136 1202 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 CUL1Q13616 776 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 KIF22Q14807 665 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 NFRKBQ6P4R8 1299 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 RNF207Q6ZRF8 634 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 MIGA2Q7L4E1 593 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 ENOSF1Q7L5Y1 443 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 RHOT2Q8IXI1 618 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 MREGQ8N565 214 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 LRRC57Q8N9N7 239 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 XXYLT1Q8NBI6 393 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 ATP6V0A1Q93050 837 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 CCDC102AQ96A19 550 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 AGBL1Q96MI9 1066 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 TEPSINQ96N21 525 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 NTPCRQ9BSD7 190 aaKnown RBP9.03□□□□□ -0.96
SPG11-209ENST00000558253 INTS2Q9H0H0 1204 aaKnown RBP9.03□□□□□ -0.96
SPG11-209ENST00000558253 KIAA1586Q9HCI6 787 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 GDF3Q9NR23 364 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 TMEM51Q9NW97 253 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 ZNF112Q9UJU3 913 aa9.03□□□□□ -0.96
SPG11-209ENST00000558253 TMEM59LQ9UK28 342 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms