RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 SLC9C1Q4G0N8 1177 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 KLHL7Q8IXQ5 586 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 SPICE1Q8N0Z3 855 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 FAM167BQ9BTA0 163 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 TXLNGYQ9BZA5 131 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 RXFP1Q9HBX9 757 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 RPL26L1Q9UNX3 145 aaKnown RBP11.76□□□□□ -0.53
USP3-206ENST00000558157 C2CD2Q9Y426 696 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 POLR2AP24928 1970 aaKnown RBP11.76□□□□□ -0.53
USP3-206ENST00000558157 hCG_1642624A0A1W2PR95 340 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 LRRC53A6NM62 1247 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 USP17L5A8MUK1 530 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 PGRMC1O00264 195 aaKnown RBP11.76□□□□□ -0.53
USP3-206ENST00000558157 ATP5HO75947 161 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 GOLGA8HP0CJ92 632 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 CALB2P22676 271 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 SLC1A4P43007 532 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 MAP3K10Q02779 954 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 DHX9Q08211 1270 aaKnown RBP11.76□□□□□ -0.53
USP3-206ENST00000558157 CCDC15Q0P6D6 951 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 RPS6KA1Q15418 735 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 PPP2R5EQ16537 467 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 C10orf76Q5T2E6 689 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 NBPF12Q5TAG4 269 aaPredicted RBP11.76□□□□□ -0.53
USP3-206ENST00000558157 PDXDC1Q6P996 788 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 NCAPG2Q86XI2 1143 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 HOMEZQ8IX15 550 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 MDM1Q8TC05 714 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 BAP1Q92560 729 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 KANSL2Q9H9L4 492 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 RNPEPL1Q9HAU8 725 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.76□□□□□ -0.53
USP3-206ENST00000558157 PNMA2Q9UL42 364 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 ZBTB21Q9ULJ3 1066 aa11.76□□□□□ -0.53
USP3-206ENST00000558157 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.76□□□□□ -0.53
USP3-206ENST00000558157 MYH7BA7E2Y1 1941 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 SSC5DA1L4H1 1573 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 FAM205CA6NFA0 338 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 GLTPD2A6NH11 291 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 TULP1O00294 542 aaPredicted RBP11.75□□□□□ -0.53
USP3-206ENST00000558157 GJB6O95452 261 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 SERPING1P05155 500 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 PCK1P35558 622 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 USP11P51784 963 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 EARS2Q5JPH6 523 aaKnown RBP11.75□□□□□ -0.53
USP3-206ENST00000558157 PPP1R15BQ5SWA1 713 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 C6orf118Q5T5N4 469 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 PRAMEF18Q5VWM3 479 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 USP17L2Q6R6M4 530 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 RRAGAQ7L523 313 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 TMEM109Q9BVC6 243 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 KBTBD4Q9NVX7 518 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 LMCD1Q9NZU5 365 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 NYAP2Q9P242 653 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 UTP11Q9Y3A2 253 aaKnown RBP11.75□□□□□ -0.53
USP3-206ENST00000558157 SCN4AP35499 1836 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 WDR90Q96KV7 1748 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 FRMPD2Q68DX3 1309 aaPredicted RBP11.75□□□□□ -0.53
USP3-206ENST00000558157 PITPNM2Q9BZ72 1349 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
USP3-206ENST00000558157 PYGLP06737 847 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 PSMC4P43686 418 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 SH3BGRP55822 239 aaPredicted RBP11.75□□□□□ -0.53
USP3-206ENST00000558157 GFPT1Q06210 699 aaPredicted RBP11.75□□□□□ -0.53
USP3-206ENST00000558157 EHHADHQ08426 723 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 PLS1Q14651 629 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 MAN2A1Q16706 1144 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 SLC35G1Q2M3R5 365 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 HGSNATQ68CP4 663 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 IRGCQ6NXR0 463 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 BTNL9Q6UXG8 535 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 TAOK1Q7L7X3 1001 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 SIAH1Q8IUQ4 282 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.75□□□□□ -0.533e-6■■■■■ 29
USP3-206ENST00000558157 MIPOL1Q8TD10 442 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 PRCCQ92733 491 aaPredicted RBP11.75□□□□□ -0.53
USP3-206ENST00000558157 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.75□□□□□ -0.533e-7■□□□□ 11.3
USP3-206ENST00000558157 FAM192AQ9GZU8 254 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 NEUROG2Q9H2A3 272 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 ADAM7Q9H2U9 754 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 CTTNBP2NLQ9P2B4 639 aa11.75□□□□□ -0.53
USP3-206ENST00000558157 ATP8B3O60423 1300 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 DOCK1Q14185 1865 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 FTCDO95954 541 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 PKN1Q16512 942 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 FOXR2Q6PJQ5 311 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 ANKRD13CQ8N6S4 541 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 ENDOVQ8N8Q3 282 aaKnown RBP11.74□□□□□ -0.53
USP3-206ENST00000558157 FMO2Q99518 471 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 CPVLQ9H3G5 476 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 ARL2BPQ9Y2Y0 163 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 BAZ2BQ9UIF8 2168 aaKnown RBP11.74□□□□□ -0.53
USP3-206ENST00000558157 SNHG28P0DPA3 235 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 EPHX2P34913 555 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 CAP2P40123 477 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 GNAQP50148 359 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 MKRN3Q13064 507 aaKnown RBP11.74□□□□□ -0.53
USP3-206ENST00000558157 ADAM9Q13443 819 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 SLC18A3Q16572 532 aa11.74□□□□□ -0.53
USP3-206ENST00000558157 ANKRD40Q6AI12 368 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms