RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 GPT2Q8TD30 523 aa23.46■■□□□ 1.35
CASC4-204ENST00000557945 MINDY3Q9H8M7 445 aa23.46■■□□□ 1.35
CASC4-204ENST00000557945 TBC1D7Q9P0N9 293 aa23.46■■□□□ 1.35
CASC4-204ENST00000557945 ADGRA3Q8IWK6 1321 aa23.46■■□□□ 1.35
CASC4-204ENST00000557945 PVALEFA0A1B0GWK0 134 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 FRMD3A2A2Y4 597 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 GPR182O15218 404 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 ACRP10323 421 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 SFPQP23246 707 aaKnown RBP eCLIP23.45■■□□□ 1.34
CASC4-204ENST00000557945 COASYQ13057 564 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 CDCA2Q69YH5 1023 aaPredicted RBP23.45■■□□□ 1.34
CASC4-204ENST00000557945 CATSPER4Q7RTX7 472 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 FAM228AQ86W67 206 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 IFNLR1Q8IU57 520 aaPredicted RBP23.45■■□□□ 1.34
CASC4-204ENST00000557945 SEPT8Q92599 483 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 NTPCRQ9BSD7 190 aaKnown RBP23.45■■□□□ 1.34
CASC4-204ENST00000557945 NFKBIZQ9BYH8 718 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 IFIH1Q9BYX4 1025 aaKnown RBP23.45■■□□□ 1.34
CASC4-204ENST00000557945 MRPL44Q9H9J2 332 aaKnown RBP23.45■■□□□ 1.34
CASC4-204ENST00000557945 IL23AQ9NPF7 189 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 SEL1LQ9UBV2 794 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 PADI3Q9ULW8 664 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 ST3GAL5Q9UNP4 418 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 MYH11P35749 1972 aa23.45■■□□□ 1.34
CASC4-204ENST00000557945 K7ENM7 598 aa23.44■■□□□ 1.34
CASC4-204ENST00000557945 MBD3O95983 291 aa23.44■■□□□ 1.34
CASC4-204ENST00000557945 CXCL10P02778 98 aa23.44■■□□□ 1.34
CASC4-204ENST00000557945 RPN1P04843 607 aaKnown RBP23.44■■□□□ 1.34
CASC4-204ENST00000557945 NMT1P30419 496 aaKnown RBP23.44■■□□□ 1.34
CASC4-204ENST00000557945 MAGEA10P43363 369 aaPredicted RBP23.44■■□□□ 1.34
CASC4-204ENST00000557945 MBTD1Q05BQ5 628 aa23.44■■□□□ 1.34
CASC4-204ENST00000557945 DPYDQ12882 1025 aa23.44■■□□□ 1.34
CASC4-204ENST00000557945 CCDC47Q96A33 483 aaKnown RBP23.44■■□□□ 1.34
CASC4-204ENST00000557945 SCN5AQ14524 2016 aa23.44■■□□□ 1.34
CASC4-204ENST00000557945 K7ERI5 159 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 ERLIN2O94905 339 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 PFKMP08237 780 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 EFNA5P52803 228 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 NCKAP1LP55160 1127 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 CAMK4Q16566 473 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 MAPK6Q16659 721 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 PLEKHG4Q58EX7 1191 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 DBF4BQ8NFT6 615 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 ERCC4Q92889 916 aaPredicted RBP23.43■■□□□ 1.34
CASC4-204ENST00000557945 HPS3Q969F9 1004 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 ERVK-5Q9HDB9 667 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 EXOC1Q9NV70 894 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 ARHGAP28Q9P2N2 729 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 SIP14410 1827 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 LTBP2Q14767 1821 aa23.43■■□□□ 1.34
CASC4-204ENST00000557945 DENND3A2RUS2 1198 aa23.42■■□□□ 1.34
CASC4-204ENST00000557945 H0YCG3 227 aa23.42■■□□□ 1.34
CASC4-204ENST00000557945 KLRC4O43908 158 aa23.42■■□□□ 1.34
CASC4-204ENST00000557945 SMC2O95347 1197 aa23.42■■□□□ 1.34
CASC4-204ENST00000557945 KMT5BQ4FZB7 885 aa23.42■■□□□ 1.34
CASC4-204ENST00000557945 HAUS6Q7Z4H7 955 aa23.42■■□□□ 1.34
CASC4-204ENST00000557945 ELOA2Q8IYF1 753 aaPredicted RBP23.42■■□□□ 1.34
CASC4-204ENST00000557945 TMEM161BQ8NDZ6 487 aa23.42■■□□□ 1.34
CASC4-204ENST00000557945 PRKCBP05771 671 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 PTMSP20962 102 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 FAM26FQ5R3K3 315 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 CNKSR3Q6P9H4 555 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 SLC17A8Q8NDX2 589 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 SMARCE1Q969G3 411 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 VWCEQ96DN2 955 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 FIZ1Q96SL8 496 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 CLSTN2Q9H4D0 955 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 TMEM134Q9H6X4 195 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 OLFML3Q9NRN5 406 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 PRMT7Q9NVM4 692 aaPredicted RBP23.41■■□□□ 1.34
CASC4-204ENST00000557945 PDE4DIPQ5VU43 2346 aa23.41■■□□□ 1.34
CASC4-204ENST00000557945 PHLPP2Q6ZVD8 1323 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 GCNT3O95395 438 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 MAPTP10636 758 aaKnown RBP23.4■■□□□ 1.34
CASC4-204ENST00000557945 EPHB4P54760 987 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 NCBP1Q09161 790 aaKnown RBP23.4■■□□□ 1.34
CASC4-204ENST00000557945 STRN3Q13033 797 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 TMEM132AQ24JP5 1023 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 ZNF720Q7Z2F6 126 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 APBB2Q92870 758 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 CCDC113Q9H0I3 377 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 NUP62CLQ9H1M0 184 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 FZD8Q9H461 694 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 PCDHA5Q9Y5H7 936 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 CEP290O15078 2479 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 ACTN1P12814 892 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 PCBP1Q15365 356 aaKnown RBP eCLIP23.4■■□□□ 1.34
CASC4-204ENST00000557945 TCTN1Q2MV58 587 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 ZC2HC1CQ53FD0 456 aaPredicted RBP23.4■■□□□ 1.34
CASC4-204ENST00000557945 ZNF365Q70YC5 407 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 C16orf59Q7L2K0 433 aa23.4■■□□□ 1.34
CASC4-204ENST00000557945 PIN4Q9Y237 131 aaKnown RBP23.4■■□□□ 1.34
CASC4-204ENST00000557945 TET1Q8NFU7 2136 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 B4GALT5O43286 388 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 TSPAN1O60635 241 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 FGBP02675 491 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 MYBP10242 640 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 SCP2P22307 547 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 EHHADHQ08426 723 aa23.39■■□□□ 1.33
CASC4-204ENST00000557945 PRPF4BQ13523 1007 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms